Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00556 ATGGCGAGAGTGAAGCACACGCCAGCTTCGCGCAAAGTTGGTAAAGGTAAAGCCAAAAGCGCTTCCACGTCCACTCCACCGTCACAGCAATCGGGAAAGATGAAAAAGCGCAGTAAGCCAGGAACAGCGGCGCTTCGCGAGATACGTCGTTTTCAGAGAAGTTGTGAGCTTCTTATTCCGGCTGCCCCCTTTATCAGATGTGTCAAACAAATTACACATCAATTCTCTACGGAGGTGTCTCGCTGGACGCCTGAAGCTGTGATAGCACTGCAGGAGGCAGCTGAGGAATGTCTGGTTCACTTGTTTGAAGATGGAATGCTATGTGCAATTCACGCTAGACGTGTTACACTTATGACAAAGGATATTCAGTTGGCTAGGAGGCTTGGAGTAATAGGAAGGCCTTGGTGA 408 0.4926 MARVKHTPASRKVGKGKAKSASTSTPPSQQSGKMKKRSKPGTAALREIRRFQRSCELLIPAAPFIRCVKQITHQFSTEVSRWTPEAVIALQEAAEECLVHLFEDGMLCAIHARRVTLMTKDIQLARRLGVIGRPW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00556 135 MobiDBLite consensus disorder prediction 1 42 - -
Vian9g00556 135 Pfam Core histone H2A/H2B/H3/H4 6 128 IPR007125 GO:0003677
Vian9g00556 135 FunFam Histone H3.2 34 132 - -
Vian9g00556 135 MobiDBLite consensus disorder prediction 17 36 - -
Vian9g00556 135 PRINTS Histone H3 signature 8 22 IPR000164 GO:0000786|GO:0003677|GO:0030527
Vian9g00556 135 PRINTS Histone H3 signature 54 71 IPR000164 GO:0000786|GO:0003677|GO:0030527
Vian9g00556 135 PRINTS Histone H3 signature 111 132 IPR000164 GO:0000786|GO:0003677|GO:0030527
Vian9g00556 135 PRINTS Histone H3 signature 95 111 IPR000164 GO:0000786|GO:0003677|GO:0030527
Vian9g00556 135 SMART h35 30 133 IPR000164 GO:0000786|GO:0003677|GO:0030527
Vian9g00556 135 SUPERFAMILY Histone-fold 10 128 IPR009072 GO:0046982
Vian9g00556 135 Gene3D Histone, subunit A 2 130 IPR009072 GO:0046982
Vian9g00556 135 PANTHER HISTONE H3 1 128 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00556 Vian-Chr9 6362150 6366047 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00556 K11253 - gmx:100811872 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00556 9 6362150 6366047 Vian9g00556 9 6362150 6366047 ECH