Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00540 ATGATAGTTAAGCGGACGATGAAAGCCGAAGCGCCGAACCTGAAAAGATGTAAGATTGACGGTACCGAGAATGCGATTCAGAAGAAGCGTAGGGTGAACGGGTTGTTCTCGCTGGGAGTGTCGGGGGATGCTGAATATTTCAGCAGTGGTTCTGGTTCTTGGAGCAGTGAAGGATCGTATTGGGGTGGCGGTGGTGAGGTTCAGTCGAATTCGAATTCTTTTCTGTTCAATGGGAAAATGGTGAAGGAGGCATGTCGTCCTCCGCTTCTGCGGTCCTCACGTGGACGCCTTCAGAAGCTTCCGTCGAGGTTCAATGACTCGGTTCTTGAGGCGGACGGAGACTCGAGCTTTGAAGATAACGATAAGAGTTATGTGGAGGACGGAAGGGGTGGCATTGGTGTGAGTGTGGAGAAGAGTGATAGTGTGTGTTGTTCGTCTAGTGTTGGGAGAAGAACTGGTGTTATGGCTGAGAGTAATACATCTGGGATTAGTTTTGAGGGTGTGGACCAAAAACCCAATGGATTGAAGAAGAACGAGGTTTTCAAGCTGGAGGATTTTTCTTTGGGGGATATAGTTTGGGCTAGGTGTGGGAAGAGGTATCCGGCTTGGCCTGCTGTGGTGATTGATCCTGCCTTGGAAGCTCCCGAGTCCGTACTCAGCTGTTGTATTCCCGGCGCGCTCTGCGTGATGTTTTTTGGTTATTCAAAGAATGGAACTCAGAGGAGCGATGGTGTGCAGGACTACGCGTGGGTGAAGCAGGGAATGGTGTTCCCTTTCTCTGAGTTCTTGGACAGGTTTCAGGGGCAGACTCGGTTGTACAAGAGCAAACCTAGTGACTTCCGCATGGCCCTGGAGGAGGCAATGCTGGCAGAAGATGGTGTTCTGGAATCACATTTGGGAAGAGGGGAAGTATCTGATGCAGAAGCCCATCCTGCTCAACTTATGGAGGCTACCTGCTATTATGTTGACGAAGAATACTACGGGCAGGAACAGGTTACAAGGTACTGTGCTGGTTGTGGTCTGATGTTGCCATGCAAAACCATGAAGAAGATGAAGGATTCAAATTGTGCACCCCGATTTTATTGTAAACATTGCACTAAGGATCTGGAAAATACGGATTATTACTGTCCAGATTGCAAGGGAAAATGCAGTAGCAAATTACCAGCATCACAAACCTACAATCCGAAAATCAACTCAATAGAGAATAGCCAAAAATCTATGATACCCGATAGTGTATTGGTGGTGTGCAAGGACATGGAAGGAATATATATCCCAAAGCTTCATCTAGTCATGTGCAATTGTGGCTCTTGTGGGTCGAGGAAGCAGACACTTAGTGAATGGGAAAAACATACAGGTTGCAGAGCGAAAAAATGGAAACATAGTGTGAAAGTGAAAAGTACAATGCTACCTCTGGAAAAATGGTTGGCTGAACACATTCCACTAGAGGGAGTATCCCAGCAGTTAGATCAGCAGCAGGTACTTGCTTTTTTGCAAGGTGGTGCTCTAAAGCCAACGGATGTTGAAATGTTGTGGGTTCATGTAACATGTGCTTGGTTTCGACCTCAAGTTGTTTTCCAAGACCATGAGGCCATGGAACCTGCTGTGGGAATCCTTAAAATTCCTCCTAATTCGTTTGTGAAGTTGCATTCCATGGAGAAGAATGGGACTCAAATAACAAAGAAGCTAATATATTGTTCAGTTCACAGGGTCCCAAATCCAGATTCAGTACTGGTCGTACACACACCCCTGGGGATTTTCTCTCCCAGAACTTCACTTCAAAATCAGAAGGGATGCTTCAGGGGATCAAGGCTAATTTCATCAAAGAATATAGAGCTTATTGAATCTTCAACCACTGAAAATGAGGTAGTTGAGCCACTATCTGCTGCTAGATGTCGTGTCTACCGTAGGTCTACTAATAAGAGAGCCAATGAACCAATAATTCACTTGCCTAAGGGACCCAGCCTTCATTCTTTAGATGCAATAACCCTGTTGAACGACTTTAAGGATGGTGATGAATCTAAAGTATTCACTTCTTTCAAGGAACGTCTTCATCATTTAAGGGAAATGGAAAAATTGAGAGTTTGCTTTGGAAAATCGGGCATTCATGGATGGGGCCTCTTTGCTCGTAGAAATATACAAGAAGGAGAGATGGTTGTTGAGTATCGAGGTGTGAACGTAAGGCGTAGTGTTGCTGATCTGAGGGAAGCAAAATATCGTTCGGAAGGCAAAGATTGCTATTGCATGCCAAACTGCTACGCAAGGATAATGAGTCTGGGTGATCAGGAGAGCCGGATTGTTCTTATTGCCAAGACTAATGTTTCTGCTGGTGAAGAACTAACGTATGACTACTTGTTCGATCCAGATGAGCGGGATGACCTGAAAGTTCCCTGCCTTTGCAAAGCCCCCAATTGTAGGAGATTTATGAATTAG 2430 0.4547 MIVKRTMKAEAPNLKRCKIDGTENAIQKKRRVNGLFSLGVSGDAEYFSSGSGSWSSEGSYWGGGGEVQSNSNSFLFNGKMVKEACRPPLLRSSRGRLQKLPSRFNDSVLEADGDSSFEDNDKSYVEDGRGGIGVSVEKSDSVCCSSSVGRRTGVMAESNTSGISFEGVDQKPNGLKKNEVFKLEDFSLGDIVWARCGKRYPAWPAVVIDPALEAPESVLSCCIPGALCVMFFGYSKNGTQRSDGVQDYAWVKQGMVFPFSEFLDRFQGQTRLYKSKPSDFRMALEEAMLAEDGVLESHLGRGEVSDAEAHPAQLMEATCYYVDEEYYGQEQVTRYCAGCGLMLPCKTMKKMKDSNCAPRFYCKHCTKDLENTDYYCPDCKGKCSSKLPASQTYNPKINSIENSQKSMIPDSVLVVCKDMEGIYIPKLHLVMCNCGSCGSRKQTLSEWEKHTGCRAKKWKHSVKVKSTMLPLEKWLAEHIPLEGVSQQLDQQQVLAFLQGGALKPTDVEMLWVHVTCAWFRPQVVFQDHEAMEPAVGILKIPPNSFVKLHSMEKNGTQITKKLIYCSVHRVPNPDSVLVVHTPLGIFSPRTSLQNQKGCFRGSRLISSKNIELIESSTTENEVVEPLSAARCRVYRRSTNKRANEPIIHLPKGPSLHSLDAITLLNDFKDGDESKVFTSFKERLHHLREMEKLRVCFGKSGIHGWGLFARRNIQEGEMVVEYRGVNVRRSVADLREAKYRSEGKDCYCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDERDDLKVPCLCKAPNCRRFMN 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00540 809 ProSiteProfiles PWWP domain profile. 188 262 IPR000313 -
Vian9g00540 809 Pfam PHD-zinc-finger like domain 496 544 - -
Vian9g00540 809 PANTHER PHD FINGER PROTEINS 551 786 - -
Vian9g00540 809 SUPERFAMILY SET domain 690 805 IPR046341 -
Vian9g00540 809 CDD PWWP_AtATX3-like 189 293 - -
Vian9g00540 809 Gene3D - 175 296 - -
Vian9g00540 809 SMART PostSET_3 793 809 IPR003616 -
Vian9g00540 809 SUPERFAMILY Tudor/PWWP/MBT 181 317 - -
Vian9g00540 809 ProSiteProfiles Post-SET domain profile. 793 809 IPR003616 -
Vian9g00540 809 Gene3D SET domain 662 746 IPR046341 -
Vian9g00540 809 Pfam PWWP domain 189 290 IPR000313 -
Vian9g00540 809 Pfam SAND domain 412 478 IPR000770 GO:0003677
Vian9g00540 809 ProSiteProfiles SET domain profile. 692 784 IPR001214 GO:0005515
Vian9g00540 809 SMART set_7 692 790 IPR001214 GO:0005515
Vian9g00540 809 SMART PWWP_4 186 260 IPR000313 -
Vian9g00540 809 Gene3D SET domain 747 809 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00540 Vian-Chr9 6137737 6145578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00540 - - jre:109010365 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00540 9 6137737 6145578 Vian9g00540 9 6137737 6145578 ECH