Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00537 ATGGCACCAAGAAACAGTCGCGGAAAGGCCAAGGGTGAGAAGAAAAAGAAGGAAGAAAAGGTTCTCCCAGTTGTCATAGACATCACAGTGAAGCTTCTAGATGAAGCTCATGTTCTCAAGGGAATATCAACAGACAGAATAATAGATGTTCGTCGGCTTTTATCAGTGAATACGGACACATGTTATGTCACAAATTTTTCCCTGTCACATGAGGTAAGAGGGCCACGTCTGAAGGACACGGTGGACGTGTCCGCACTGAAGCCCTGCCTTCTGACTTTAGTTGAAGAGGAATACAATGAAGAACGAGCAGTGGAGCACGTGCGAAGACTCCTCGACATCGTTGCCTGCACCACGAGCTTTGGTCCGTCGCCGCCTCCGCCACCGAAGAACGCGGCCGGCACGGTCACGAAGTCCGGCAAGTCTGAGATCCCGCCGGCGAAAGATGCGGCGGTGACGATTGCGGACGTGGACGGCGAGATAAGTCACTCGTGCCCTAAGCTGGAGAACTTCTACGAGTTTTTCTCTCTTTCGCACCTCACCGCTCCTATACAATATGTGAAGAAAGGTTCGAGGAGGTGTGTGGAGGAGATATCGGAGGAGGATTATCTGTTCTCGCTGGATGTGAAGGTGTGCAACGGGAAAGTGGTGCACGTTGAGGCTTGCAGAAAGGGTTTCTACAGCGTTGGGAAGCAGCGGATTCTGTGCCATAATCTGGTTGATTTGTTGAGACAGCTTAGCAGAGCTTTCGATAATGCTTTCGATGATCTCTTGAAGGCATTTTCAGAGCGTAACAAGTTTGGGAATCTCCCATATGGCTTCAGAGCCAACACGTGGCTTGTTCCTCCTGTTGCTGCACAGTCACCCTCATCTTTTCCTCCTCTTCCTGTGGAGGATGAAACATGGGGAGGGAATGGTGGCAGTCTCGCAAAAGACGGAAAGTATGATTTGGTTCCTTGGGCCAAAGAGTTTTCATTAATTGCGTCTATGCCTTGCAAGACAGCAGAAGAAAGACAAGTTCGTGATAGAAAAGCATTTCTTCTGCACAGCCTGTTTGTTGATGTTTCTATTTTCAGAGCAATAAGGGCTGTTAAACATGTTATGGAAGAGCCCAATTTTAGTTGCTCCGTTGTAGAAAATAATATTGTTTACACTGAGAGAGTAGGTGACTTGAGCATCAAGGTCTTGGAAAATGGTTCTGTTGCAAGCTCTAAGATTGATACTAAAATTGATGGAGTTGAAGCTACTGGAGTAAATCAAAAGGATCTAATAGAACGAAATCTACTGAAAGGCATCACTGCGGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTCGTTAACGTAAGATACTGTGGTTATGTGGTCGTTGTGAAAGTTGAGGTTGGAGTTAGGGAAAATGTTGACTCTCCATCTCAACAAACTATTGAATTGTTTGATCAGCCAGAGGGTGGGGCCAATGCACTCAATATTAACAGTCTGAGATTACTTCTTCACAACACAACTCCACCAGAAAACAATAAACCAATGATTCAGATACAAACGTTTGAGAGTGAAGAGATTGGTGCTTCTCATTCTTTTGTGGAGAAGCTGATTAAAGAAACTCTTCCTAAGCTTGAGGAGGAAGAACCTGGTATGGACTATTTTGTAAGATGGGAACTTGGAGCTTGCTGGATGCAACATTTGCAAGACCAAAATAATAATACAGAAAAAGATAAGAAGCCATCCTTAGAGAAGGCTAAGAATGAGATGAAGGTCGAGGGTCTTGGGAAACCCCTTAAAGCCCTAAAGAATTTTAAAAAGAAATCTGATTCAAGCAATACTACTTCTGCATCTGAATATCCAAAATTTAGTCGGGAGTCTGAAAGCCCTCCATTGCCCTCAATTGAGTCGCAACATGAAACTACAGAAGCTGAGAATGAGCTTGTTCTGAAAAGGATGTTATCTGAGGAAGCTTTTACCCGATTTAAAGAATCGGGAACTGGACTTCACTGCAAGTCCATGCATGATTTGATTGACTTATCTCAAAAATATTACAAAGACGTTGCACTCCCAAAATTGGTAGCAGATTTTGGCTCATTAGAACTCTCACCAGTTGATGGACGCACTCTAACTGATTTTATGCATACTAGGGGCCTACGAATGCGTTCTCTTGGACATGTTGTCAAGCTTTCAGAAAAGCTTTCACATGTGCAGTCGCTTTGTATTCATGAAATGATAGTTCGAGCTTTTAAGCACATCCTGCATGCAGTAATTTCCTCTGTTAACAAGGAGAAAATGGCTTCATCAATTGCTGGTGCTTTGAATTTTCTGCTCGGTGTTCCTGGAAATAGAGATTCAGATAAATCACATGAAGTTCATCCCTTGGTGTGGAAATGGCTAGAGGTATTTTTGAAAAAGCGATTTGATTGGGATCTTCACAGGTTGAATTACAAAGATGTGAGGAAATTTGCAATTTTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTTGTTCCACGGGATTTTGACATGGATTCTTCTATTCCCTTCCACAAATCTGACATTGTCAGCTTGGTCCCTGTTCACAAGCAAGCTGCATGCTCATCTGCAGATGGAAGGCAGCTCCTGGAGTCATCCAAGACTGCTTTAGACAAGGGAAAGCTTGAGGACGCCGTTACCTATGGCACAAAGGCTCTTGCTAAGCTAGTAGCAGTTTGTGGTCCCTACCATCGAATGACAGCGGGAGCATACAGCCTCCTTGCTGTAGTTTTATATCATACTGGAGACTTCAATCAGGCTACAATATATCAACAAAAAGCTTTGGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCTGATACCATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTACAGCACACAGAGCTGGCTCTGAAGTATGTAAAGCGTGCTTTATATCTTCTGCATCTAACGTGTGGCCCATCTCATCCAAACACTGCTGCTACTTACATTAATGTGGCTATGATGGAAGAAGGTCTGGGAAATGTACATGTCGCTCTCAGATATCTTCACAAAGCTTTAAAGTGCAACCAAAGATTACTTGGCACAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTGATGGAAGCATATCCATTGAGCGTGCAGCATGAGCAAACAACTTTGCAAATTCTTAGGTCAAAACTTGGTCCTGATGACTTGCGAACACAGGATGCTGCGGCTTGGCTGGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGGAAACCTGATGCATCAATAGCTAGCAAAGGCCATTTGAGTGTGTCAGATTTGCTTGACTATATTAATCCTGATCATGATGCTAAAGGGAGAGATGCAGCAACAAAGAGAAGGAGCCAGATAACAAAGGTGAGAGCGACGTCCTACCTTAACCTTGGCATGTCAAGTTCTGATGAGTCTTCAAAAGAAATTCCTAAAGAGGCCTCAGATGAAGAGGTACAAATACCTGTAGCAGAAGGTAGTGCAGATTCTGAGCAGGAAAGCAACTCTGGACCTGACTCAGAACATACTATTTTAAAACAAAAACCAGATGAAAAGCCAGAAATTTATGAGGAAATCTTGTCAGAAGCACATGCTGAAGGAGAAGATGGATGGCAACCAGTTCAAAGACCAAGATCAACTGGCTCATATGGCCGGAGACTGAAGCAGCTGAAGCAGAGAAGGGCGACACTTGGCAAAGTTTATAGTCATCAAAAGAATGTGGAAGTTGGCACAGAATCTCCTTTTGTAAGGAATGCCAGTCCAAATAGTAGGTATTATTTCATGAAGAAGAGGACAATTTCCCATGGAGGTTATACGGATGATCATACAGTAAACATCACCCAAGGCCCTAAATTTGGAAGGAAAGTAGTTAAAGCTGTTACATACAGGGTCAAATCCATACCCTCAACATCCAAGGCTAGTGCAAATGAGACGTTAGAAACAGGTGATAAGCTGTTTACTTCTCTTTCAGAACCTGATCCAATTGATGTTAATCCAGTTAAGAATTCTATAGTTAGTCTTGGAAAGTCTCCTTCATACAAGGAAGTGGCGTTAGCTCCTCCAGGAACAATCTCCAAGTTCCAGGTCTATAATCCTCCAAGTGAGATTTCTGTTAGCAGTGAACATGATAGTGGCAAAGCTGAAGAGGAGGATATTGAAGCTAATAGGGATGCTAATCCAACCCCAGCTGAGGCAAATGATATGAATAAAGAGAAGAATAATAATACTGTTTCCGATTCTGTTGATGATTCACAGGATGATACTGGAGTTACTACTGAGAGGAAAGAGGAAACTCAGTTAATTGTTGCTGTGCAAGATGATTGTATGAGTGCTGAGGGGAAATTAGGAGATGTTGAAACTCAAGGAGAAATCGATAATAGCATATTGATTCAGGCATTAGATGATCACGTGGATTCTTCCAAAAAAGAGCTCGATGCAAGTAAGTTGTCTGGCAGTTTGGAACCTAGTGATAGTACAAATCCCATTTCCCAAGGTGGGGAGGATTTAAGGGTCAATGTATCGTCATCAAATCAGAGTCACACTGGGGGCATCCCGTATAAGAAACTGTCTGCATCTGCAGCTCCATTCAACCCATCTCCTGCCATTGCACGTGGTCCACCAATTGCCATGAATATGACTCTTCCTTCTGGTCCTACTCCGGTTCCTGCAATTGGCCCCTGGCCAGTAAACATGAATGTTCATCCTGGACCTACTACTGTGCTACCCGCAGTTTCCCCCATGTGCTCCTCTCCTCATCATGCATATCCATCGCCTCCAACTACACCAAACATGATGCAACCACTGCCATTTATGTATCCTCCTTATACTCAACCTCAATCATTGCCACCTAGCAACTTTCCGGTCAGTAGCAGTGCCTTTCATGCGAATCATTTTACATGGCAATGTAATATGAACCCTACAGTATCTAAGTTTGGTCCTGGTGCTGTTTGGCCTGGTTGTCATCCCGTGGAATTTCCTCTTGCGTTACCTATTGTTGAACCAATCCCGGATCCCATTTCAGAGTCACAAGTTCTGAGTCATGGTTCTGAAAGTCCAAGTTCAGCTTCGGTTCTTCATGAGGACATTGATAATATTGGTGATTCTAATCAATTGGTAAAAGCTTTAACATCAGACATAAGTGAAGATGAAGCAGTGAGAGCTGGTTCAGAAAGCCTACAAGAAAATGGTGATATGAATTTACATGGGAGTGAAAATTCTGGGAACAAACAAAATCAAAACACTGGTTCAAATGGCAACTCTGGCAGTAGTGAAACAAACATGGATAGCGAGAAAACCTTCAGCATTTTGATTAGGGGTAGAAGAAATCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTTACTCGACCCAATGGCTCACAGTCATTTAAGGTTATTTATAACCGCGTAGTTAGAGGAAGTCATGCATCCAAGTCTATCGATCTCTCGTCTAGTAAAGATTGCACTGCTACTGCTTGA 5544 0.4316 MAPRNSRGKAKGEKKKKEEKVLPVVIDITVKLLDEAHVLKGISTDRIIDVRRLLSVNTDTCYVTNFSLSHEVRGPRLKDTVDVSALKPCLLTLVEEEYNEERAVEHVRRLLDIVACTTSFGPSPPPPPKNAAGTVTKSGKSEIPPAKDAAVTIADVDGEISHSCPKLENFYEFFSLSHLTAPIQYVKKGSRRCVEEISEEDYLFSLDVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAFDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAQSPSSFPPLPVEDETWGGNGGSLAKDGKYDLVPWAKEFSLIASMPCKTAEERQVRDRKAFLLHSLFVDVSIFRAIRAVKHVMEEPNFSCSVVENNIVYTERVGDLSIKVLENGSVASSKIDTKIDGVEATGVNQKDLIERNLLKGITADENTAAHDITTLGVVNVRYCGYVVVVKVEVGVRENVDSPSQQTIELFDQPEGGANALNINSLRLLLHNTTPPENNKPMIQIQTFESEEIGASHSFVEKLIKETLPKLEEEEPGMDYFVRWELGACWMQHLQDQNNNTEKDKKPSLEKAKNEMKVEGLGKPLKALKNFKKKSDSSNTTSASEYPKFSRESESPPLPSIESQHETTEAENELVLKRMLSEEAFTRFKESGTGLHCKSMHDLIDLSQKYYKDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHILHAVISSVNKEKMASSIAGALNFLLGVPGNRDSDKSHEVHPLVWKWLEVFLKKRFDWDLHRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSSIPFHKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGTDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRSKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPDHDAKGRDAATKRRSQITKVRATSYLNLGMSSSDESSKEIPKEASDEEVQIPVAEGSADSEQESNSGPDSEHTILKQKPDEKPEIYEEILSEAHAEGEDGWQPVQRPRSTGSYGRRLKQLKQRRATLGKVYSHQKNVEVGTESPFVRNASPNSRYYFMKKRTISHGGYTDDHTVNITQGPKFGRKVVKAVTYRVKSIPSTSKASANETLETGDKLFTSLSEPDPIDVNPVKNSIVSLGKSPSYKEVALAPPGTISKFQVYNPPSEISVSSEHDSGKAEEEDIEANRDANPTPAEANDMNKEKNNNTVSDSVDDSQDDTGVTTERKEETQLIVAVQDDCMSAEGKLGDVETQGEIDNSILIQALDDHVDSSKKELDASKLSGSLEPSDSTNPISQGGEDLRVNVSSSNQSHTGGIPYKKLSASAAPFNPSPAIARGPPIAMNMTLPSGPTPVPAIGPWPVNMNVHPGPTTVLPAVSPMCSSPHHAYPSPPTTPNMMQPLPFMYPPYTQPQSLPPSNFPVSSSAFHANHFTWQCNMNPTVSKFGPGAVWPGCHPVEFPLALPIVEPIPDPISESQVLSHGSESPSSASVLHEDIDNIGDSNQLVKALTSDISEDEAVRAGSESLQENGDMNLHGSENSGNKQNQNTGSNGNSGSSETNMDSEKTFSILIRGRRNRKQTLRMPISLLTRPNGSQSFKVIYNRVVRGSHASKSIDLSSSKDCTATA 1847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1496 1541 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 122 143 - -
Vian9g00537 1847 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 10 1439 IPR027523 GO:0006996
Vian9g00537 1847 SMART tpr_5 993 1026 IPR019734 GO:0005515
Vian9g00537 1847 SMART tpr_5 951 984 IPR019734 GO:0005515
Vian9g00537 1847 SMART tpr_5 909 942 IPR019734 GO:0005515
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1182 1197 - -
Vian9g00537 1847 Gene3D Tetratricopeptide repeat domain 982 1113 IPR011990 GO:0005515
Vian9g00537 1847 Gene3D Tetratricopeptide repeat domain 868 981 IPR011990 GO:0005515
Vian9g00537 1847 ProSiteProfiles Clueless (Clu) domain profile. 297 574 IPR025697 -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1153 1238 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 603 618 - -
Vian9g00537 1847 SUPERFAMILY Hypothetical protein c14orf129, hspc210 177 265 IPR023231 -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1396 1412 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1421 1440 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1506 1540 - -
Vian9g00537 1847 CDD CLU-central 699 839 IPR033646 -
Vian9g00537 1847 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 864 1114 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1198 1226 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 566 640 - -
Vian9g00537 1847 Pfam Tetratricopeptide repeat 992 1067 - -
Vian9g00537 1847 Pfam Tetratricopeptide repeat 908 978 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1389 1453 - -
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1737 1783 - -
Vian9g00537 1847 Pfam Mitochondrial function, CLU-N-term 44 114 IPR028275 -
Vian9g00537 1847 SUPERFAMILY TPR-like 874 1047 IPR011990 GO:0005515
Vian9g00537 1847 MobiDBLite consensus disorder prediction 567 591 - -
Vian9g00537 1847 ProSiteProfiles TPR repeat profile. 909 942 IPR019734 GO:0005515
Vian9g00537 1847 MobiDBLite consensus disorder prediction 1747 1783 - -
Vian9g00537 1847 Pfam Translation initiation factor eIF3 subunit 135 697 838 IPR033646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00537 Vian-Chr9 5961749 5977724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00537 K03255 - gmx:100808136 3121.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00537 9 5961749 5977724 Vian9g00537 9 5961749 5977724 ECH