Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00536 ATGGCAAAGAGTGGATCTTGGACTCGGATATGGCCATCTTTTGTCAGGCTATGTCTTCTGAATCTTGTCTTGAATTTCAAAATCACAGCATTGGCTGATGACACTGGAACTGTTGCTGCTACGACAGAAAACACCTGCAAGAACACAAATTATCAAACTTTCCTCCCTCCACCGTACCAGAATATCTCCCACATGATATGCACACCTGTATGGCATACCTTTGAATTGAGGTACATCCTGAATGGTGATACCACAACTATGATACTATCTGCTCCCTACACTATAGGGTGGGTAGGAATTGGATTTTCCAGAGATGGCATGATGGTTGGTTCCAGTGCAATGGTTGGATGGATTAGTAAACATGGTCATGCAAAAATAAAGCAATTTTACCTAAGAGGAAGGAGGCAATCAGAAGTCATAATAGACAAAGGGGAACTTCCCCTCAATAATGTCCCTGCAGCTGTGGCCACTAATGGGGCTGAAATTCATTTGGCATTTCAGTTGCAGACCACAACCCCATTTCAGAAACAGCCAATTCTGTTGGCCTTTGGCAGTAAATATCCACAGAACCACCACCTCTCCAACCATGAAGACAAAACAGCAATTGTGTTTGATTTCTCTGCAGGTTCTACGGGTCCTGTATCCCATGAATTGACTCAGATGAGAACGAATCATGGAATTTTGGGCATAATAGGGTGGGGTCTGATCCTGCCTGTAGGGGCAATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGCTCTATCTCCATGCAATCATTCAGTTTGTGGGATTCACATTTGGGCTTAGTACAGTCATTCTTGGATTACAACTCTATTCCAAAATGCATGCCCATATACAAGCTCACAGAGGCATAGGCATCTTTGCTCTCGTACTGAGTATTCTTCAGATTTTTGCATTGATCTTAAGACCAAAGAAGGATTCCAAGATCCGAAAAATTTGGAATTTGTACCACGGTTGGTTTGGAAGGTTGGCACTCATATTTGCGGCCATTAACATAGTGCTGGGGATGCAAGCTGCTGGGGCAGGAAGTGATTGGAAGATAGGCTATGGGTTCCTTTTTGGTATTATGGTTACTGCAGCAATTGTTCTTGAAGTATTGGCTTATTTAAAAAGATCAGAGATGCGTTCTCTACCTCCTAACTTTCAAATAGACCCTGTTGGAGGACCTACATTTCCAAGTAATTAG 1212 0.4266 MAKSGSWTRIWPSFVRLCLLNLVLNFKITALADDTGTVAATTENTCKNTNYQTFLPPPYQNISHMICTPVWHTFELRYILNGDTTTMILSAPYTIGWVGIGFSRDGMMVGSSAMVGWISKHGHAKIKQFYLRGRRQSEVIIDKGELPLNNVPAAVATNGAEIHLAFQLQTTTPFQKQPILLAFGSKYPQNHHLSNHEDKTAIVFDFSAGSTGPVSHELTQMRTNHGILGIIGWGLILPVGAIIARYFRHKDPLWLYLHAIIQFVGFTFGLSTVILGLQLYSKMHAHIQAHRGIGIFALVLSILQIFALILRPKKDSKIRKIWNLYHGWFGRLALIFAAINIVLGMQAAGAGSDWKIGYGFLFGIMVTAAIVLEVLAYLKRSEMRSLPPNFQIDPVGGPTFPSN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00536 403 CDD DOMON_DOH 73 201 IPR045266 -
Vian9g00536 403 Pfam DOMON domain 75 143 - -
Vian9g00536 403 Gene3D - 200 384 - -
Vian9g00536 403 SMART 561_7 224 345 IPR006593 -
Vian9g00536 403 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 32 377 - -
Vian9g00536 403 Pfam Eukaryotic cytochrome b561 225 346 IPR006593 -
Vian9g00536 403 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Vian9g00536 403 CDD Cyt_b561_FRRS1_like 204 374 - -
Vian9g00536 403 ProSiteProfiles DOMON domain profile. 72 184 IPR005018 -
Vian9g00536 403 SMART DOMON_3 97 184 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00536 Vian-Chr9 5957594 5959751 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00536 - - gmx:100807608 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00536 9 5957594 5959751 Vian9g00536 9 5957594 5959751 ECH
Vian6g01058 6 27920180 27922241 Vian9g00536 9 5957594 5959751 PCT