Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00517 ATGGGGAGTGTGGCGTGGAAGCAGCTTCTTCTGAACGCTTTGGAATCAAACGCTCACCTCAAGCACTCTTCTTTCATGCAACTCGCAACCATAGGAACAAACGGAACACCTTCGAACCGCACTGTCGTTTTCAGAGGATTCCAAGATAATACTGATAACATCCAAATTAACACTGATGCTCGCACTCGCAAGATTGAAGAGCTCAAGCTTTGCTCCTCTGCTGAGATTTGTTGGTATTTCACGGATTCCTGGGAGCAATTTCGGATAAACGGGAATGTAGATATCATTGATGGTTCGAATGCCGAACCCCTAAAACTTCAGCAAAGAGAACATTCATGGTTTGCCAGTTCATTGAGATCAAGGTCGCAATACCTGTGCCCCAACCCTGGACTTCCCTGTCTACATGAGCAAGCTCAGCCAGATATATCATTAGATCCTTCTACAGGTCCAATTGATGCTTTTTGCCTTCTGATCCTAGAGCCGCATCAGGTTGATTACTTGAATCTTAAGAGTAACCAGAGGCTAACATTCAAATCAAGTGTGAGTGCTGCAGCAGAGAAAAGCTGGACTGTGGAGAGGGTCAACCCATAA 591 0.4535 MGSVAWKQLLLNALESNAHLKHSSFMQLATIGTNGTPSNRTVVFRGFQDNTDNIQINTDARTRKIEELKLCSSAEICWYFTDSWEQFRINGNVDIIDGSNAEPLKLQQREHSWFASSLRSRSQYLCPNPGLPCLHEQAQPDISLDPSTGPIDAFCLLILEPHQVDYLNLKSNQRLTFKSSVSAAAEKSWTVERVNP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00517 196 SUPERFAMILY FMN-binding split barrel 5 196 - -
Vian9g00517 196 Gene3D - 3 196 IPR012349 -
Vian9g00517 196 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 5 196 IPR000659 GO:0004733|GO:0008615|GO:0010181
Vian9g00517 196 Pfam Pyridoxamine 5'-phosphate oxidase 5 96 IPR024624 GO:0010181
Vian9g00517 196 NCBIfam PPOX class probable FMN-dependent enzyme, alr4036 family 5 196 IPR024015 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00517 K00275 - gmx:100779815 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00517 9 5667990 5669764 Vian9g00517 9 5667990 5669764 ECH