Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00488 ATGCAGCAGACACCGTCAATGATTCCTATGATGCCTTCATTCCCACCTACTAACATAACCACCGAGCAGATTCAAAAGTACCTTGATGAGAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTTGCGGAATGTGCCCAGTACCAAGCCCAGCTTCAAAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCTCAGACCCCAGCAATGCCTCCACAGATGGCTCCACACCCTGCCATGCAACCAGGATTCTATATGCAACATCCTCAGGCAGCAGCAGCAGCAATGGCTCAGCAGCAAGGCATGTTCCCCCAGAAAATGCCATTACAATTTGGTAACCCACATCAAATTCAGGATCAGCAGCAGCAGCTACACCAGCAGGCTATCCAAGGTCAAATGGGACTGAGACCGGGAGGGATAAACAATGGCATGCATCCAATGCACAGTGAAGCTGCTCTTGGAGGTGGCAACAGTGGTGGTCCACCATCGGCTGCCGGTCCAAATGATGCACGTGGTGGAAGCAAGCAAGATGCTTCTGAGGCTGGGACAGCTGGTGGAGACGGGCAAGGTGGCTCTGCTGAGGGGTCAGAAGCGGCCAAGTGA 624 0.5096 MQQTPSMIPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQMAPHPAMQPGFYMQHPQAAAAAMAQQQGMFPQKMPLQFGNPHQIQDQQQQLHQQAIQGQMGLRPGGINNGMHPMHSEAALGGGNSGGPPSAAGPNDARGGSKQDASEAGTAGGDGQGGSAEGSEAAK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00488 207 MobiDBLite consensus disorder prediction 123 137 - -
Vian9g00488 207 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 2 204 IPR044779 GO:0003713
Vian9g00488 207 MobiDBLite consensus disorder prediction 123 207 - -
Vian9g00488 207 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00488 Vian-Chr9 5156043 5159190 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00488 - - vun:114167142 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00488 9 5156043 5159190 Vian9g00488 9 5156043 5159190 ECH