Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00486 ATGAAAATGTTTCAGAAAGCCTTGGCTTCAACTCAAGTCTTTCTTTTCTTCTGCGTTGTGGTGTTCTCTACTCCACCAGAGGATCCGATCAGGTGTTCTTCAGGGAACACAAGCTGCACCATCACAAACTCCTATGGGATGTTTCCCGATCGAAGCATCTGCCATGCCTCTCAGGTGCTGTACCCCACCACCGAGCAAGAGCTTGTGTCAATGGTTGCATCAGCAGTCAGAAGCAAAACGAAGATGAAAGTTGCGACCCGGTTTTCGCACAGCATCCCGAAGCTGGTGTGCCCAGAAGGCGAAAATGGGGTGCTGATAAGCACAAAATACCTGAACAAGATAGTGAAAGTTGACGTGGAAGCAAGAACAATAACAGTGGAGAGTGGTGTGACACTGAAGGATGTTATCAGTGAGGCTGCAAAGGCAGGGTTGGCTTTGCCATATGCACCATATTGGTGGGGTTTGACCATTGGAGGGCTCATGGGAAGTGGTGCACATGGAAGCACTTTGTGGGGGAAGGGAAGTTCTGTTCATGATTATGTGGTCAACCTTAGGATTGTCAGGCCTGCTGCTCCTCAAGAAGGTTATGCTAAGGTTGAGATCCTCCATGAGCAACATGAAGATCTCAATGCAGCAAAACTCTCACTCGGTGTGCTTGGAGTTATTTCACAGATTACTCTAAAAGTAGAAGGTATCTTCAAGCGATCCATCACGTATGTGGCAAAAAATGATTCAGATTTGGGAGAACAAGTTGCTTCTTTTGGATATGCACATGAGTTTGGTGATATAACGTGGTACCCAAGTCAACGTAGGGCTGTGTATCGTGTTGATGATCGTGTGCCAATTAATGCATCGGGCAATGGTCTTTACGACTTTATCCCCTTCCGTCCCATTCCTTCTCTTGCATTGGCACTCCTAAGAACCACAGAAGATGTTCAAGAATCTGCTGGTGATGCCGATGGGAAGTGCATAAGTGCTAAGGCCACAACGACTACCCTCGTCACCTCAGCATATGGACTTACTAATAATGGTATAATCTTCACTCGATACCCTGTAATTGGATTTCAGAACCGGCTTCAGGCATCTGGGACATGCTTGGATAGTCTTAAAGATGCAAAGATCACAGCATGTGCCTGGGATTCCAGGGTGAAGGGAGAGTTTTTTCACCAAACCACATTCAGCATTGGTTTGTCAGTTGTGAAAGATTTCATTGAAGATGTGCAGAAGCTGGTTGAATTGGAGCCAAAGGGGTTGTGTGGCTTAGATCTTTACAATGGAATTCTCATGCGTTATGTGAAAGCTTCAAATGCCTACTTGGGGAAGCAAGAGGATGCTTTAGACTTTGATATCACCTACTACCGTAGCAAGGACCCTATGAGTCCTAGGCTCTATGAAGACATTGTTGAAGAGATTGAGCAAATTGGGATTTTCAAATATGGAGGATTACCTCATTGGAGTAAGAATAGGAACTTGGCGTTTGAAGGAGCCATCAAGAAGTACAAAAACGCAGAGAAATTTTTGAGGGTTAAAGAGAAGTATGATTCAGAAGGGGTTTTCTCAAGTACGTGGACAGACCAAATGCTTGGACTAAAAGATGGGGTGACGATAGTGAAAGATGGATGTGCTTTAGAAGGGTTGTGCATTTGCTCACAGGATAGTCATTGCAATCCAAGCAGAGGTTACTATTGCAGAGCAGGCAAAGTTTACAAGGAAGCAAGGGTTTGTACTCATTTGAAATCCCAATGA 1746 0.4485 MKMFQKALASTQVFLFFCVVVFSTPPEDPIRCSSGNTSCTITNSYGMFPDRSICHASQVLYPTTEQELVSMVASAVRSKTKMKVATRFSHSIPKLVCPEGENGVLISTKYLNKIVKVDVEARTITVESGVTLKDVISEAAKAGLALPYAPYWWGLTIGGLMGSGAHGSTLWGKGSSVHDYVVNLRIVRPAAPQEGYAKVEILHEQHEDLNAAKLSLGVLGVISQITLKVEGIFKRSITYVAKNDSDLGEQVASFGYAHEFGDITWYPSQRRAVYRVDDRVPINASGNGLYDFIPFRPIPSLALALLRTTEDVQESAGDADGKCISAKATTTTLVTSAYGLTNNGIIFTRYPVIGFQNRLQASGTCLDSLKDAKITACAWDSRVKGEFFHQTTFSIGLSVVKDFIEDVQKLVELEPKGLCGLDLYNGILMRYVKASNAYLGKQEDALDFDITYYRSKDPMSPRLYEDIVEEIEQIGIFKYGGLPHWSKNRNLAFEGAIKKYKNAEKFLRVKEKYDSEGVFSSTWTDQMLGLKDGVTIVKDGCALEGLCICSQDSHCNPSRGYYCRAGKVYKEARVCTHLKSQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00486 581 PANTHER GULONOLACTONE OXIDASE 23 570 - -
Vian9g00486 581 NCBIfam FAD-dependent oxidoreductase 25 576 IPR010030 -
Vian9g00486 581 Pfam FAD binding domain 57 189 IPR006094 GO:0050660
Vian9g00486 581 SUPERFAMILY FAD-binding/transporter-associated domain-like 50 229 IPR036318 GO:0050660
Vian9g00486 581 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 232 IPR016166 GO:0071949
Vian9g00486 581 Pfam D-arabinono-1,4-lactone oxidase 389 526 IPR007173 GO:0003885|GO:0016020
Vian9g00486 581 Gene3D - 113 230 IPR016169 -
Vian9g00486 581 FunFam L-gulonolactone oxidase 5 113 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00486 Vian-Chr9 5113127 5117290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00486 K00103 - gmx:100790483 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00486 9 5113127 5117290 Vian9g00486 9 5113127 5117290 ECH