Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00470 ATGGCTTCAACCTCTTCTGCTCTCACTGTATCCTCTTCTTCCACACTTTTTGATGGCAAGGCTCCAAGGCACTCACCACCTCTTTCTCCACAATGTGTCAGCCTTCCCCTTCCCCATTTCCACTCTCAAAACCGTTCATGGAAGACCACTGCTTATAATGGCAAGATTGCTCGTAATGTTATTGCAATGGCCACAGGAGAGGCACCGGCCGAAGCTTCCTCGACTGAGGTGCCAGAGATTGTCAAGACTCTTCAAGAAACTTGGGACAAAGTTGATGATAAGTATGCAGTGAGTTCACTGGCCCTGGTTGGTGTGATTGCATTATGGGGCTCAATTGGATTGATCTCAGCAATTGATAGGCTTCCCTTGATTCCTGGGATTCTTGAGATTGTAGGCATTGGCTACACTGGGTGGTTCGTATATAAGAACATAGTTTTCAAGCCAGACAGGGAAAATTTGGTACAGAAAGTAAAAGAAACATACAATGAAATACTCGGGAGCAACTGA 507 0.4556 MASTSSALTVSSSSTLFDGKAPRHSPPLSPQCVSLPLPHFHSQNRSWKTTAYNGKIARNVIAMATGEAPAEASSTEVPEIVKTLQETWDKVDDKYAVSSLALVGVIALWGSIGLISAIDRLPLIPGILEIVGIGYTGWFVYKNIVFKPDRENLVQKVKETYNEILGSN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00470 168 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 82 166 IPR025564 -
Vian9g00470 168 PANTHER - 24 167 IPR033344 GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00470 Vian-Chr9 4770065 4773076 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00470 - - gmx:100306403 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00470 9 4770065 4773076 Vian9g00470 9 4770065 4773076 ECH