Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00429 ATGCGGAGAATCGTTGCAGACAGATTCAGGCGCCTTTTCAACCGTTCATTCCTTCTTCATCGTCATCATCACAATCACAATCACCCTCCCTTTCCTGCTTCTTCCTCTCTCACTTCTCACTATCCGTTTTCCCCCTATCGCTTCTTCTTTTCTACTCCTTTTTCTTCCATGGCTTCTGATTCACCTTTCCCTGTCACTGCTCAAAACATCAACCCAAAGGTTCTGAAATGTGAGTACGCCGTTAGAGGAGAGGTTGTCACACTTGCTCAGAATTTGCAAAAGGATTTACTGGCCAATCCCGGTTCTCATCCATTTGACGAGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGTCTCCAATAACCTTTTTCCGAGAGGTTCTTGCTTTAACTGATCATCCAGCTATATTGGACAAAAGTGAAACACAGGGTTTGTTCAGCGCTGATGCAATAGAACGAGCTTGGCAGATTGTGGAACAGATTCCCGGTAGAGCAACTGGTGCCTATAGCCACAGTCAGGGTGTCAAGGGTTTGCGTGATACAATAGCTGCTGGAATTGAAGAGCGTGATGGTTTTCCTGCTAATCCTGATGACATTTTCATGACAGATGGTGCAAGCCCTGCAGTCCATAACATGATGCAATTACTTATCAGGTCGGAAAATGATGGTATTTTGTGTCCCATTCCACAGTATCCTCTATACTCAGCTTCAATTGCCCTCCATGGTGGCTTCTTGGTACCTTATTATCTAGATGAAGCAAGCGGTTGGGGATTGGAAATACCTGAACTCAAGAAGCAATTGGACGCTGCCAAGTCTAAGGGCATCAATGTTAGGGCTTTAGTTGTTATAAATCCTGGCAATCCAACGGGGCAGGTTCTTTCTGAGGAAAATCAGCGCCATATAGTAGATTTTTGCAAGCAAGAAGGTTTGGTTCTTTTAGCTGATGAGGTATATCAAGAAAATGTTTATGTCCCTGAGAAGAAATTTCACTCATTCAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGACGTCACTTTAGTATCCTTTCAATCAGTCTCCAAAGGCTACCATGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGCTTTTCTGCAGAAGTGAGGGAGCAAATATATAAAATGGCATCTGTCAACCTTTGCTCTAATATCTCTGGTCAAATTCTTGCAAGCTTGGTCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAATCATTCATGGCTGAGAAGGGAAATATTTTGGCATCGCTTGCTAGGCGTGCAAAGACACTAGAAGATGCATTCAACAAACTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCCCAAATTCGTCTGTCCCAAAAGGCTATCAAAGCTGCAGAGGAGGCAAAAACTGCACCTGATAACTTCTATTGCAAGCGGTTGCTTAATGCCACAGGAGTAGTAGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTCAGATGCACCATTTTGCCCCAAGAAGAAAAGATTCCAGCCATTGTCTCCCGTTTGACAGAGTTCCATGAAAAATTCATGGATGAGTTCCGTGACTAA 1629 0.4426 MRRIVADRFRRLFNRSFLLHRHHHNHNHPPFPASSSLTSHYPFSPYRFFFSTPFSSMASDSPFPVTAQNINPKVLKCEYAVRGEVVTLAQNLQKDLLANPGSHPFDEILYCNIGNPQSLGQSPITFFREVLALTDHPAILDKSETQGLFSADAIERAWQIVEQIPGRATGAYSHSQGVKGLRDTIAAGIEERDGFPANPDDIFMTDGASPAVHNMMQLLIRSENDGILCPIPQYPLYSASIALHGGFLVPYYLDEASGWGLEIPELKKQLDAAKSKGINVRALVVINPGNPTGQVLSEENQRHIVDFCKQEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDVTLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKMASVNLCSNISGQILASLVMSPPKVGDESYESFMAEKGNILASLARRAKTLEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAEEAKTAPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEEKIPAIVSRLTEFHEKFMDEFRD 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00429 542 Pfam Aminotransferase class I and II 167 521 IPR004839 GO:0009058|GO:0030170
Vian9g00429 542 CDD AAT_like 155 531 - -
Vian9g00429 542 FunFam Alanine aminotransferase 2 119 169 - -
Vian9g00429 542 Gene3D Aspartate Aminotransferase, domain 1 68 540 IPR015422 GO:0003824
Vian9g00429 542 Gene3D - 170 416 IPR015421 GO:0003824
Vian9g00429 542 PANTHER ALANINE AMINOTRANSFERASE 57 541 IPR045088 GO:0008483
Vian9g00429 542 Gene3D - 119 169 - -
Vian9g00429 542 FunFam alanine aminotransferase 1 405 542 - -
Vian9g00429 542 FunFam alanine aminotransferase 2 170 416 - -
Vian9g00429 542 SUPERFAMILY PLP-dependent transferases 68 536 IPR015424 -
Vian9g00429 542 Coils Coil 428 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00429 Vian-Chr9 4220071 4225766 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00429 K00814 - gmx:100776235 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00429 9 4220071 4225766 Vian9g00429 9 4220071 4225766 ECH