Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00428 ATGGACTTTATCCCATCTCAACCTTTGGGGAAAAAAGATTTGCAGAAAAAAGAAACAGTACATCTCATACTTCAGGCATCATCTGATAAAAATATAACAAGAATAAATGATTCTGAGTGGGAAAAACAGAGAAGCCTTGTACACAGTATCCTAGTGGGAAGGATTTCTTTTGCAAACCTAACGAAAGATCCATCTTTGGTTGATGGTGTACTCTCTTTCTCTCGTGTTCATCCCTTCCATCTCCTGCAGATAGAAAAGACTAAGGAGGGTCCGCTTTTCTCACTCGTTTTTGTGATGCAGGAAGCACTCTCTGAGAGCAACGTGAACATGTATGGGAAAAACAATGATAACCCTTTTGCGGATGACTTCCCTGATCCACTTTGCAAGCTCAACCTGAAGGAAACCTCTGAGTTTGTCAAGTCTTTGCCTGTGCCGAGTGGCAGAGCCGAAAGCAGAGGCCACTCTGTTTCACAACAGAGGAGACTGTTAGAGGCTCCCTCCACTCCTGGGAGACCAGTTTTCACCTTCAGCTCTGGCCTTCCAAGAAAGAGCTTCCCTTCCAAGTGGGATGATGCAGAGAAATGGCTTATGAGCACTTCTTGCCATGACTCACCTGCTCACAACAACATTAACAACAACACTCTCAAGGTTTCAGTCTCGGACTCCTCAAAGGTTGCAACCAGACAACAATGTGAAGATGTTGGCTTTAAGCAGCAAATGGAAAATTTCTCGGAGAAATCAAGGGTCACCGAAGAAAGGGTGTCCAAAGCTGTCCCCAACTTCCACTGGTCTCCTTCGTTGGACCACCAGCATAACACCCTCAGTGCTTTCCATGGTGTTAAAGACATTGTACTCAAAGATAAGTTCACAGACAGCATAGAGCCTATTTTGCCAAATTTGAGATATTTAGAGCCAGCAAAGGAAGGGTTCTTGTTTAGGAACCAAGTTGGTGGGGCAATGCAAGATGCTTGCACAGAAGTGGTTCAACATAGAGACATTGGCACTGAGATGACTCCTCTGGGAAGTTCCACAACTTCAAGATGCCACACCCCAGTTAAGATTTCATCACCTCCTCGTCACAACACTCCTGCAAGTAGATCAGGACCATTGGCCTTGGCTAGCACTGCCTGCACTCTTGATGTCATTCAGCTGGAGGAGTGCCATTTTTCTAAACTGCAACTAGGATCACAGTATGACATAGTCACTTCAAATTGGAGCTCAAGTGAAGAGGAAGAAAAGGAAATATCAAAAAGTTTGAGGCACAATGGGAGCCACAAAGCTGATTCCGACTGCATAGCTGCTTCATGGGAAGAAGAGGAGAAGACCAAGTGCTGTTTAAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTCCAAAGTGCTAAAGCAGAGGCCAGGTCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAGATCAAACCTTGAAGAGAAGTTGATGAAGAGGATGTCAGTGGTTCACAGGAAAGCTGAGGAGTGGAGAGCAGAAGCCAGACAGCAACACTTGGAGCAAATTCAGAAAGCCACAGAGCAAGCTCAGAAGATAATTCATAAACATAACTCACATTTTTCAAAGCCAAGTTCATGTGGTTGCTTCCCTTGCAATAACAACCATCATTGA 1647 0.4444 MDFIPSQPLGKKDLQKKETVHLILQASSDKNITRINDSEWEKQRSLVHSILVGRISFANLTKDPSLVDGVLSFSRVHPFHLLQIEKTKEGPLFSLVFVMQEALSESNVNMYGKNNDNPFADDFPDPLCKLNLKETSEFVKSLPVPSGRAESRGHSVSQQRRLLEAPSTPGRPVFTFSSGLPRKSFPSKWDDAEKWLMSTSCHDSPAHNNINNNTLKVSVSDSSKVATRQQCEDVGFKQQMENFSEKSRVTEERVSKAVPNFHWSPSLDHQHNTLSAFHGVKDIVLKDKFTDSIEPILPNLRYLEPAKEGFLFRNQVGGAMQDACTEVVQHRDIGTEMTPLGSSTTSRCHTPVKISSPPRHNTPASRSGPLALASTACTLDVIQLEECHFSKLQLGSQYDIVTSNWSSSEEEEKEISKSLRHNGSHKADSDCIAASWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEARSRKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRAEARQQHLEQIQKATEQAQKIIHKHNSHFSKPSSCGCFPCNNNHH 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00428 548 Coils Coil 507 527 - -
Vian9g00428 548 MobiDBLite consensus disorder prediction 143 168 - -
Vian9g00428 548 Coils Coil 463 490 - -
Vian9g00428 548 MobiDBLite consensus disorder prediction 336 367 - -
Vian9g00428 548 Pfam Remorin, C-terminal region 433 529 IPR005516 -
Vian9g00428 548 PANTHER OS02G0116800 PROTEIN 153 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00428 Vian-Chr9 4211203 4218436 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00428 - - gmx:100776089 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00428 9 4211203 4218436 Vian9g00428 9 4211203 4218436 ECH