Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00426 ATGGATGCAGTGGACAAGACTTTTTCTGAGCTTGTCAGCATCGTCAAAACGTGGATTCCCTGGCGATCTGAACCGGCAAATGTGTCTAGGGATTTTTGGATGCCCGATCAGAGTTGTAGAGTATGCTACGAGTGTGATTCACAGTTTACCTTGTTTAACCGTAAGCACCACTGTCGTTTATGTGGACGGATTTTCTGTAACAAGTGTACAACAAACTCGGTTCCTGCCCCAGTTTGGGTAATAGCTGGAAAAGATTCATGTACAACAAACACGAGTGCATCGAACAAGCTTGAGTTGGAAAAGATTCGTGTATGTAATTATTGTTACAAGCAATGGGAGCAAGGTGTAGTTGCTTTTGATAACAGTATTCCGGCTTCCAATCTGGATAATAGTGCTTCAGCATCAACTTCAAGCTTGAATAGCAGTAAAACCAGTGCCACTGCAAACAGTAGTAATATTACTCTTTGCTCCATGCCTTATTCAGTTGGATCTTATCAACAAACGCAACAGGGTTCTGTTCTGAACCTACATAAATCACCTGTGAAGGGAAAAGACACGGATACTGATAGGGAAGGCTTATCGGCATTAGGAGGGAGGAGTGATCTTGTAGCAGATCTGGGTGATTCATTCCCGAGGCAATGTGGATTCGCAATTAATAGGACTGATGATGATGAGGATGAGTATGGTGTGTATCGGTCAGATTCCGACACTAGACATTATTCTCAAGTGAATAATTACTATGGACAGGCTGAGTTTGATAAGATAGGCCTCATTGATGGCTCAAGGAAAGTGGATAATGATGTTGAAAACATTGATGCAAAACTCCCTTCAAACTACAGTTTTGACACTGACATACAGGGTTTGGAAGGAGCCTCAATTATTGCAAAAAATGAGGATGAACCTGATATCTGTGATGAAAATGAAGCCCCTTCCTCATTATATGTCTCAGAGGACGTTGATGTTGAACCTGTTGATTTTGAAAATAACGGACTTCTCTGGCTCCCTCCTGAACCAGAAGACGAAGAAGATGAACATGAAGCTATTTTGTTTGATGATGATGATGATGATGATGGGAATGTCATTGGAGAGTGGGGGTATATACGTAGTTCTAGCAGTTTTGGAAGTGGTGATTATAGACAGAGAGATAGGTCAAATGAGGAGCAGAAGAAGGTAATGAAGAATGTAGTTGACGGGCACTTTAGGGCATTGGTAGCTCAGCTGCTGCAGGTTGAAAACCTATCTGTTGAAGATAATGACGAGAACAGTTGGCTGGAGATTGTCACATCTCTGTCATGGGAAGCGGCTACAATATTGAAACCAGATATGAGCAAAGGTGGAGTGATGGACCCAGCTGGTTATGTGAAAGTCAAATGCATAGCATGTGGGAATCGCAATGAAAGTGTGCTGGTTAAAGGAGTTGTTTGTAAAAAAAATGTGGCTCACCGGCGAATGTCATCAAAAGTGGATAAACCTCGCCTGTTGATCCTTGGAGGGGCTCTGGAGTATCAGCGTGTTACCAACCTCTTTTCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCTGTGGCAAAGATAGCTTCACACCAGCCAAACATGTTGTTAGTGGAGAAATCAGTCTCACGATATGCACAGGAATATCTTCTTGCAAAAGACATAACTCTGGTTCTCAATGTCAAGAGACCACTTTTGGAGCGCGTAGCACGTTGCACAGGTACTCAAATAGTGCCTTCAATCGACCATCTTTCATCGCAAAAGTTGGGTTACTGTGAATCAGTTCATGTTGAGAAGTTTCTTGAAGACCTAAACTGTGTTGGTCAGTGTGGGAAAAAAACATTGAAAACATTGATGTTTTTTGAAGGTTGCCCAAAACCATTTGGTTTCACTATTTTACTGAAAGGGGCTGACAAGGATGAGTTGAAAAAGGTAAAGCATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTATGGAGACATCTTTTCTTGCAGATGAGGGAGCATCCCTGCCAGAAATTCCATTAAACAGTCTGGCCCTTCCAGATCAAGCATTAGCCATTCAGAGGTCCATTTCAACAGTTCCGGGCTTCGGTATTGCTGACAATGAAAAACCTCAAGGGCATGAACCTGACACTGGACCACGGAGAACCAAAAGTGTCCCAATTTCTGAACTAGCATCTACGACCTGCAGTGCAGGGCCATGTGTCTCTAATGGTGCTTCTCAATTGATGCCACTTGGATCAAGTCTCGACCATTCAACTGCCTTTTTCTCCTCCATTGCTGCTTCAGGAAATTCAATTGCAGAATCACACTATGATAAGCTTCATCCATGCTCTAGTAGAGACAGAAATGAAATGAACCTCAAACAACCTGTGGTGGAAGAAACTTCTACGGTGGACGACACCCTGGTTATTTTGGATGATCCTACTGCAGTCGACCCTGGAACTTCAAAGAAATTATATCAAGGCTTGTCAACTAACACTCCACAAAATGATGATAGCAAAATTTCTACAAACCAGTTAAGTGGATCAGGATCTCTATCTCCAAAAGATGGTCCAAACCATCCCGAGAATCTTGAAATCCCAAACGAAGAGTTTATTCTTGAAAAAGAAGAGTTTCCTCCATCCCCGTCTGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGGTGTGTATGGAAGGGAACTGTGTGTGAGAGGTCTCATCTCTTTCGAATTAGATACTATGGCAATTTTGATAAACCATTGGGTCGGTATCTGCGAGACCACTTATTTGATCAGAGTTATCGATGCCATTCTTGTCAAATGCCATCAGAAGCACACGTGCACTGCTATACTCATCGTCAGGGAACACTTACCATATCAGTCAAGAAACTACCAGAAATTATCCTACCCGGGGAAAGGGATGGAAAGATTTGGATGTGGCACAGGTGCTTGCGGTGTCCAAGAATCAATGGCTTTCCTCCTGCTACACAGAGGATAGTAATGTCTGATGCTGCTTGGGGTTTATCGTTAGGGAAATTTTTGGAGCTCAGTTTCTCAAACCATGCTGCAGCCAGCAGGGTGGCAAGCTGTGGCCATTCATTACACAGAGATTGTCTTCGTTTTTACGGATTCGGAAAAATGGTTGCTTGTTTTCGATATGCATCCATTGATGTTCACTCTGTCTACCTTCCCCCCCACACACTTATATTTGATTATGGGAATCAGGATTGGATACAGCGAGAATCAGATGAGGTGGTCAACCGGGCAGAGCTTTTATTCTCTGAGGTACTCAATGGTCTCAGTCAAATTGGAGAGCAAAGATCTAATGCAGTCCAAATCAGTAATGGCCATAAAACACCTGAAGTAAGACGCCAAGTAGCTGAGCTAGAGGGGATGTTGCAAAAGGAGAAACTAGAATTTGAGGAATCTCTTCGAAAGATTTTGAATCAAGAAAAGAGAAATGGCCAACCGGGGATTGACATTCTGGAAATTAATCGATTGTGGAGGCAGTTGCTTTTTCAATCATATATGTGGGATCACCGCCTTATTTATGCAGCAAACTCAGTCAATTCCAATAATGGATCCGGTTCAAGCAGTCCAATTTCCGAAGATAAGGAGAAAACTGTTGATGAAAATAAAATGACCATCAACGCTGTTCATGGTGGTCCAAACCTTAACGAAAACCCTTGTCTTGGAGGAGGAAGTGCAGTAGTTGATGGGAAAATTTCACAAGATCTAGAAAGCGAGATGACCGAAAAAGAAAATCATGAGAAAGATGACAGATCTATTTCAAACAGAAAAAGTATAAATGATCAATCTGATCTCTTAGAACCTGAATTGGGTGTTCGCAGAACTCTATCAGATGGGCCACCCATCGTACCTAGTTTGTCTGAAACACTTGATGCAAAATGGACTGGAGAAAATCACTCTGGATTTGGCATTCCAAAGGATAACAGTTCTGTGAATCCCGATTTGGCAGATACTTTGATGATCGGTGTACAAAAGGAAACATATCATCTAGAAGATCAAAATGGTTCCAAGAGTTTTTATTCTTCTTTTAAAGGTCAAGATAATATGGAAGACTCTTCGAGCTGGTTAGGAATGCCCTTCTTGAACTTCTATCGCCAATTTAACAAAAACCTTTTTGCTAGTACGCAGAAGTTTGATCCCCTAGTTGACTACAATCCTGTTTTCGTGGCATCTTTCCGGAAGCAGGAACTCCAGGGTGGGGCAAGGCTGCTTCTGCCAATTGGTGTCAATGACACTGTAATACCAGTATATGATGACGAACCCTCAAGTGTTATAGCTTATGCCTTGATGTCATCAGAATATCATCTCCAATTGACTGATGAAGGAGAAAGGCCAAGAGAAGGAAGTGAGTTCACTTCATCATATTTTTCTGACTCAGGCACCTTCCAGTCATTCTCTTTTGTTGATGAAACAGCCTTTGATTCTCAGAAAAGTTTTGGGTCGATAGAGGATATGATACTTTCCATGTCTGGGTCTCGTAGTTCGTCAATGTTTGATCCAATGTTATATACCAAGGCTATGCATGCCAGAGTTTCCTTTGGAGAAGACGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTATGCCAAGCGTTTTGAAGCCTTAAGAAGGGTGTCTTGTCCTTCTGAGCTTGACTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAGAGTAATGTATTTTTTGCCAAAACATTGGATGATCGATTTATCATTAAACAAGTTACGAAAACAGAGCTAGAATCATTCATTAAATTTGGTCCTGAATACTTCAAGTATCTTTCTGAATCCATAGCCACTGGAAGTCCGACATGTCTGGCTAAAATTCTTGGCATATACCAGGTTACATCGAAGCATATTAAAGGAGGGAAAGAGTCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTGTATAGGAGGACTGTGACACGACTTTACGATCTTAAAGGATCTTCCAGGTCTCGGTATAATGCAGATAGTACCGGGAAAAACAAAGTTCTACTGGACCAGAACTTAATTGAAGCAATGCCAACTTCTCCTATATTCGTGGGAAACAAAGCCAAACGATCTTTAGAGAGAGCTGTCTGGAATGACACAGGTTTTCTTGCTTCTGTTGATGTAATGGACTATTCTTTACTGGTTGGGGTGGATGAAGAGAAGCATGAGTTGGTTATTGGGATCATTGATTACATGAGGCAGTATACCTGGGACAAGCATCTGGAAACATGGGTAAAAGCTTCAGGCATACTTGGGGGACCAAAGAACACACCTCCAACAGTTATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCAGATCAATGGTCTCCTCCTTCTATTGTTGCTAGTAATTCTCAGTCTGATTTAGGTGAAGACAACCCACAATCTAGGACCCCAGCTGAATGA 5487 0.421 MDAVDKTFSELVSIVKTWIPWRSEPANVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPVWVIAGKDSCTTNTSASNKLELEKIRVCNYCYKQWEQGVVAFDNSIPASNLDNSASASTSSLNSSKTSATANSSNITLCSMPYSVGSYQQTQQGSVLNLHKSPVKGKDTDTDREGLSALGGRSDLVADLGDSFPRQCGFAINRTDDDEDEYGVYRSDSDTRHYSQVNNYYGQAEFDKIGLIDGSRKVDNDVENIDAKLPSNYSFDTDIQGLEGASIIAKNEDEPDICDENEAPSSLYVSEDVDVEPVDFENNGLLWLPPEPEDEEDEHEAILFDDDDDDDGNVIGEWGYIRSSSSFGSGDYRQRDRSNEEQKKVMKNVVDGHFRALVAQLLQVENLSVEDNDENSWLEIVTSLSWEAATILKPDMSKGGVMDPAGYVKVKCIACGNRNESVLVKGVVCKKNVAHRRMSSKVDKPRLLILGGALEYQRVTNLFSSVDTLLQQEMDHLKMAVAKIASHQPNMLLVEKSVSRYAQEYLLAKDITLVLNVKRPLLERVARCTGTQIVPSIDHLSSQKLGYCESVHVEKFLEDLNCVGQCGKKTLKTLMFFEGCPKPFGFTILLKGADKDELKKVKHVVQYGVFAAYHLAMETSFLADEGASLPEIPLNSLALPDQALAIQRSISTVPGFGIADNEKPQGHEPDTGPRRTKSVPISELASTTCSAGPCVSNGASQLMPLGSSLDHSTAFFSSIAASGNSIAESHYDKLHPCSSRDRNEMNLKQPVVEETSTVDDTLVILDDPTAVDPGTSKKLYQGLSTNTPQNDDSKISTNQLSGSGSLSPKDGPNHPENLEIPNEEFILEKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIRYYGNFDKPLGRYLRDHLFDQSYRCHSCQMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIVMSDAAWGLSLGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDVHSVYLPPHTLIFDYGNQDWIQRESDEVVNRAELLFSEVLNGLSQIGEQRSNAVQISNGHKTPEVRRQVAELEGMLQKEKLEFEESLRKILNQEKRNGQPGIDILEINRLWRQLLFQSYMWDHRLIYAANSVNSNNGSGSSSPISEDKEKTVDENKMTINAVHGGPNLNENPCLGGGSAVVDGKISQDLESEMTEKENHEKDDRSISNRKSINDQSDLLEPELGVRRTLSDGPPIVPSLSETLDAKWTGENHSGFGIPKDNSSVNPDLADTLMIGVQKETYHLEDQNGSKSFYSSFKGQDNMEDSSSWLGMPFLNFYRQFNKNLFASTQKFDPLVDYNPVFVASFRKQELQGGARLLLPIGVNDTVIPVYDDEPSSVIAYALMSSEYHLQLTDEGERPREGSEFTSSYFSDSGTFQSFSFVDETAFDSQKSFGSIEDMILSMSGSRSSSMFDPMLYTKAMHARVSFGEDGPLGKVKYSVTCYYAKRFEALRRVSCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIATGSPTCLAKILGIYQVTSKHIKGGKESRMDVLVMENLLYRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRSLERAVWNDTGFLASVDVMDYSLLVGVDEEKHELVIGIIDYMRQYTWDKHLETWVKASGILGGPKNTPPTVISPKQYKKRFRKAMTTYFLMLPDQWSPPSIVASNSQSDLGEDNPQSRTPAE 1828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00426 1828 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1810 - -
Vian9g00426 1828 Gene3D - 1654 1796 - -
Vian9g00426 1828 MobiDBLite consensus disorder prediction 1807 1828 - -
Vian9g00426 1828 MobiDBLite consensus disorder prediction 824 856 - -
Vian9g00426 1828 SMART fyve_4 28 114 IPR000306 GO:0046872
Vian9g00426 1828 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1471 1795 IPR002498 GO:0016307|GO:0046488
Vian9g00426 1828 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 465 638 - -
Vian9g00426 1828 MobiDBLite consensus disorder prediction 1188 1207 - -
Vian9g00426 1828 SUPERFAMILY GroEL apical domain-like 466 638 IPR027409 -
Vian9g00426 1828 MobiDBLite consensus disorder prediction 1188 1202 - -
Vian9g00426 1828 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 113 IPR017455 -
Vian9g00426 1828 CDD Fab1_TCP 401 672 - -
Vian9g00426 1828 SMART PIPK_2 1505 1796 IPR002498 GO:0016307|GO:0046488
Vian9g00426 1828 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1654 1796 - -
Vian9g00426 1828 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 118 IPR013083 -
Vian9g00426 1828 Gene3D GroEL 465 638 IPR027409 -
Vian9g00426 1828 CDD PIPKc_PIKfyve 1532 1795 IPR044769 GO:0000285
Vian9g00426 1828 MobiDBLite consensus disorder prediction 1248 1267 - -
Vian9g00426 1828 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 119 - -
Vian9g00426 1828 Coils Coil 1126 1153 - -
Vian9g00426 1828 MobiDBLite consensus disorder prediction 703 725 - -
Vian9g00426 1828 SUPERFAMILY FYVE/PHD zinc finger 31 113 IPR011011 -
Vian9g00426 1828 MobiDBLite consensus disorder prediction 812 864 - -
Vian9g00426 1828 Pfam FYVE zinc finger 33 112 IPR000306 GO:0046872
Vian9g00426 1828 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1496 1652 - -
Vian9g00426 1828 SUPERFAMILY SAICAR synthase-like 1527 1795 - -
Vian9g00426 1828 MobiDBLite consensus disorder prediction 1248 1278 - -
Vian9g00426 1828 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1571 1737 IPR002498 GO:0016307|GO:0046488
Vian9g00426 1828 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1495 1652 IPR027484 -
Vian9g00426 1828 Pfam TCP-1/cpn60 chaperonin family 406 668 IPR002423 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00426 Vian-Chr9 4196130 4204443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00426 2 1828 EF-hand Containing Proteins AT3G14270 59.390 0.0 2056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00426 K00921 - gmx:100819364 3124.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00426 9 4196130 4204443 Vian9g00426 9 4196130 4204443 ECH