Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00425 ATGCTACACACAATTTCAACCATGGGAAAAGTTTGTCCCCAAGCACTAGAATCTTCTACTACCTGCAGTTTCACTTGCAAGCAAGAAACTTTTACCCTATGGATGAAATCTCTTGTACTGAATGGAAAAGGGTGCACTGTCTTTGATTCCAATGGCCAGATTGCATACAGAGTTGATAACTACAACTGCAAGCATAGAGCAGAAGTTCATCTCATGGACCAAAATGGTGATATTTTGTTCACTATGCTAAAAAAGCAATATAAGTTGTCCAGATTCTGGGAGGGTTATAGATTTCCAGCAACAAGAAATGACCACAAAGGACCATGCTTTCGAGTTTCAAAAACTTATAAGATCTCTAAAGGGGGTTCGATCTATGAAGTTGAACTTGGTTTGGACAAAAACCAACCCTATATTCATAAAATAGAAAGCAGCACCTGCAATTCAGCTTGCAAAATATCTAATGAGGTTGGAGTGGTGGTTGCAGAGCTAAGGAGGAAGAAGTCACATAGTGGAGTTGATTTAGGAGATGATGTTTTCACAATGGTAGTGGAGCAAAATATAGATCTTTCTCTAGTTATGGGACTTGTTGTAGCATACAATCTTATAAACTCTAAAATGTAA 621 0.38 MLHTISTMGKVCPQALESSTTCSFTCKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNCKHRAEVHLMDQNGDILFTMLKKQYKLSRFWEGYRFPATRNDHKGPCFRVSKTYKISKGGSIYEVELGLDKNQPYIHKIESSTCNSACKISNEVGVVVAELRRKKSHSGVDLGDDVFTMVVEQNIDLSLVMGLVVAYNLINSKM 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00425 206 Gene3D - 22 206 IPR038595 -
Vian9g00425 206 PANTHER - 28 202 IPR007612 -
Vian9g00425 206 SUPERFAMILY Tubby C-terminal domain-like 27 203 IPR025659 -
Vian9g00425 206 Pfam LURP-one-related 26 197 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00425 Vian-Chr9 4180895 4182509 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00425 - - gmx:100820270 376.326