Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00411 ATGGCAACCTTAAGAGTGTTTGTTGTGTTGGTTCTCTTTATTCTGAATATTCATCACTCTCATTCTGAAAAGAGCACATGTCCATCAGAAAATGAGCAACCCATGTTCATATTTGGAGACTCTCTGTATGATTCTGGAAACAATAACTACATTCCCACCTCCCCAATTTTCCAAGGCAACTTCCCTCCATATGGAGAAACTTTCTTCAACTATCCCACTGGAAGACTGTCTGATGGACGTTTGATCACAGATTTTATTGCTGACTATGCAGAGCTTTCACATATTTCTCGGTTATTCTTGGACCCTAGACGGCTTAATTCATATACTAATGGAGTCAACTTTGCATCTGCTGGAGCTGGAGCTTTGCCTGAAACTAATCCAGGATTGGTGATTAACCTGAGAACTCAAGGATTGTACTTTACGAGAGTTAGCAAGCAATTGAGGCAGCAATTTGGAGAACACAAAGCCAAGAGATTGTTGTCCACAGCTGTTTATCTTTTTTCCATTGCATCCAATGACTATGCATCCCCTTTCATTAAAAACCCCATGAATGTCACTCTTCCATACTCTCCAGAAAAATTTGTAGATTTCGTCATTGGCAACATTACAACAGTGATCAAAGGAATTTACAATGAAGGTGGAAGAAAATTTGCGTTTCTAAATGTTGCTCCTCTGAGTTGTGCTCCGTTACTAAGGACATTCGTGAATGGAACAACTGTAGAAGCATGTCTTCAAGCACAACCTTCTGCTCTTGCAAGACTACACAATATTGTTCTTTCCAGATCTTTTCAAAACCTAGAAAAACAACTGAGCGGATTCAAATACTCAATTTTTAACTTCTATGATGCAATTCTGGAATTGGTCAAGTACCCTTCAAAATATGGTTTCAGAGAGGGGAGTGTGGCTTGTTGTGGAGGTGGACCCTACAGAGGAGATTATAGTTGTGGAGGGAAAAGGGGTATCGAAGAATTTGAATTATGCAGTGATCCTGGTGAGAATGTGTTCTTTGATTCTCTTCATCCATCTGAGAAAGCTGCTGAACATTTCGCTCAGCTAATGTGGAATGGTAACAGAGATGTGATTGAGTCTTACAATCTGAAGCAGTTGTTCAACTTTTAA 1119 0.3968 MATLRVFVVLVLFILNIHHSHSEKSTCPSENEQPMFIFGDSLYDSGNNNYIPTSPIFQGNFPPYGETFFNYPTGRLSDGRLITDFIADYAELSHISRLFLDPRRLNSYTNGVNFASAGAGALPETNPGLVINLRTQGLYFTRVSKQLRQQFGEHKAKRLLSTAVYLFSIASNDYASPFIKNPMNVTLPYSPEKFVDFVIGNITTVIKGIYNEGGRKFAFLNVAPLSCAPLLRTFVNGTTVEACLQAQPSALARLHNIVLSRSFQNLEKQLSGFKYSIFNFYDAILELVKYPSKYGFREGSVACCGGGPYRGDYSCGGKRGIEEFELCSDPGENVFFDSLHPSEKAAEHFAQLMWNGNRDVIESYNLKQLFNF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00411 372 Gene3D SGNH hydrolase 23 358 IPR036514 -
Vian9g00411 372 CDD SGNH_plant_lipase_like 35 357 IPR035669 -
Vian9g00411 372 Pfam GDSL-like Lipase/Acylhydrolase 36 352 IPR001087 GO:0016788
Vian9g00411 372 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 371 IPR044552 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00411 Vian-Chr9 3985908 3996475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00411 35 371 Acyl Lipid Metabolism Gene Families AT4G10950 28.739 6.86e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00411 - - var:108346412 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00411 9 3985908 3996475 Vian9g00411 9 3985908 3996475 ECH