Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00409 ATGGATTCAAATTCAACAAAGGAGAAGCTGCAGAACAACGATGCTGTTGCAGATGAAGCCGACCTTAAGTCTTGTTATATGCAGAAGTTCAGGCTCTATGAGACTCGCTCGAAATTTTACATGATCGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGACAGATTGGAACCATCTGAATTGAATATCGTTGAAGATTCAGCAATATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGGTACATGAAGGAAACAAGTCTACAGGAGGGCTTAAATTTGTAACAACTTGCTATGGAATCATTGGATTTATCAAATTTCTTGAACCATATTACATGCTGCTTATAACGAAGCGAAGGAAGATCGGCACAATCTGTGGTCACAATATATATGCTATCACAAAGAGCGAAATGGTTCCAATTCCACATTCTACCGTGCGATCCAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTGCGAAGGACTTCTTTTTCAGCTACTCCTACAATGTTATGTTTAGTCTTCAACGCAACTTATCTGATCATAATACTACAGGGCAATCACTATATGATACCCTTTTTGTTTGGAATGAGTTCTTGACTCGTGGAATCAGGAATAATCTCCAGAATACTTCATGGACTGTAGCCTTAGTACATGGATTTTTTAAACAGGTCAAACTTTCCATATCTGACAGTGAGTTCAACTTGACTATCATTGCTAGGCGCTCACGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTTAATGAAAAGGGTAGAGTAGCTAATGATGTTGAGACAGAGCAGATAGTCTTTACAGAAGCTCGTGATGGACACCCTATGCAAATCAGTTCCGTGGTGCAGAACAGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCTAGATTGAATATAAAACCGGACATTATATTATCAAGAAAGGACTCTACTTATGAGGCCACAAGACTTCATTTTGATAATCTTGTCAAAAGATATGGAAAGCCAATTATTATTCTGAACTTGATAAAGACACGTGAGAAGAGGCCTCGAGAAACTATTCTGCGAGCCGAGTTTGCAAATGCCGTTAGGTATATTAATAAAAGTTTGAGCGGGGAAGATCGCTTGAGGTTTCTTCATTGGGATCTGCATCGGCATTCAAGATGCAAAGCTACTAATGTATTGGGACAGCTGGGAAAAGTGGCTGCATATGCTCTGAAGCTGACAGGCATCTTCTACTCTCCAGTGACCCCAAATATGAGGCTAGATGGATTATCCCAATATTCCTACTCTGAGAATAACAATGTCATTGATCACTGTATCACAGAAGAAACCAACATAAATAAGAATACTGTTGATACAGAAACAGAAATTAGCAACTGTTATTATAGGGATGATGAGAACAAAGATTACAGTGTCAAACCCCAGATGCTTCAATCCGGGGTGTTGAGGACTAACTGCATAGACTGTTTAGATCGTACCAATGTTGCTCAATATGCTTATGGACTCGCTGCACTTGGACGTCAGCTTCAAGTTTTAGGATTTATTGAATCCGAACATATTGATCTTGATAACCCTTTGGCTGGGGAATTAATGGAAGTCTATGAGTCCATGGGAGACACATTAGCCTTTCAATATGGGGGTTCTGCAGCACACAACAAGATATTTTCTGAAAGAAGAGGTCAATGGAAGGCAGCAACACAGTCCCAGGAATTTATTCGAACCCTACAACGTTATTACAACAACACATATTTAGATGGTGATAAACAAAAAGCAATTAACTTATTCTTGGGTCATTTTCAGCCGCAACAGGGAAAACCAGCACTGTGGGAGCTTGATTCAGATCAGTATTACGCTGTCAAGAGACGTGGCCTTTATTTAACAGATGGCAGCGTTAGGTCAACTATTACGAGATCTCTATCAGATGGTAACATTCTCGGTGAAAGTGATGCTTCCATTAGGAACTTGAATGATACAAATTGTCAGAAATCATCTGAAAAACCTGATAAGCATTTCGGCTTGGGATCTATGCCGGATATCTTTATTTGTGGAAGTGATATTTGTCATTGCAGGCAGATATACGGAGGAATGGTCAAGGGCAAAAATTGTGAGAGTGGTCATATTTGTTACGATGAACATGGTGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCCTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCGGAGAATATCGCAAATGAACTAGTAACCACCGAGACATCTGCTAGTGAATCTGGATCCAGCCTTAAGGGAAGGCAGAGTGCAGAAGAACTGAACAAAGATAGGAAGTACAGTGAAAGGTTTGAACGTTGGGTAAATGAAGAAGAGATGCATTTTGCTTGGAGAATATAG 2451 0.4031 MDSNSTKEKLQNNDAVADEADLKSCYMQKFRLYETRSKFYMIGRDKNRTFWRVLKIDRLEPSELNIVEDSAIYSEIECCDLLRRVHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHNIYAITKSEMVPIPHSTVRSKMAYSKDENRYKKLLCSVDLAKDFFFSYSYNVMFSLQRNLSDHNTTGQSLYDTLFVWNEFLTRGIRNNLQNTSWTVALVHGFFKQVKLSISDSEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTEARDGHPMQISSVVQNRGSIPLFWSQEASRLNIKPDIILSRKDSTYEATRLHFDNLVKRYGKPIIILNLIKTREKRPRETILRAEFANAVRYINKSLSGEDRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYSPVTPNMRLDGLSQYSYSENNNVIDHCITEETNINKNTVDTETEISNCYYRDDENKDYSVKPQMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGRQLQVLGFIESEHIDLDNPLAGELMEVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYLDGDKQKAINLFLGHFQPQQGKPALWELDSDQYYAVKRRGLYLTDGSVRSTITRSLSDGNILGESDASIRNLNDTNCQKSSEKPDKHFGLGSMPDIFICGSDICHCRQIYGGMVKGKNCESGHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENIANELVTTETSASESGSSLKGRQSAEELNKDRKYSERFERWVNEEEMHFAWRI 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00409 816 Pfam SacI homology domain 102 400 IPR002013 GO:0016791
Vian9g00409 816 MobiDBLite consensus disorder prediction 770 786 - -
Vian9g00409 816 MobiDBLite consensus disorder prediction 770 789 - -
Vian9g00409 816 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 15 681 IPR043573 GO:0043813|GO:0046856
Vian9g00409 816 ProSiteProfiles Sac phosphatase domain profile. 166 561 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00409 Vian-Chr9 3959173 3969381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00409 27 805 Acyl Lipid Metabolism Gene Families AT5G20840 55.610 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00409 K22913 - gmx:100806380 1441.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00409 9 3959173 3969381 Vian9g00409 9 3959173 3969381 ECH