Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00405 ATGAGCAGAGTTGGTGATTCGTTAAACGTGGATTTGGCGGCTGCAGTGAACAACCTCTTCAATATTCCTGAAACCATGGAAAAGTTCATGTTTCCTTCTTCTCGTGCCCATGACCACCATGAGAACAGAGGGGTTTCTAGCATCATTCCAGTGGACATTTTAGACACTGCGAAGGAATTTATATTCTTCATGGATGTTCCTGGTCTCTCGAAGTCTGAAATTCAGGTGACAGTTGAAGATGAGAAGACACTTGTGATACGAAGCAATGGGAAGAGGAAACGCCATGATGGAGATGATGAAGGGTGCAAGTATCTTAGGCTGGAGAGGAGAGGGCCTCAGAATTTGCTGAGGAAGTTCCGTTTGCCTGAGAATGCCGATGTGTCTGCAATCACAGCTAAATGCGAAAATGGGGTTCTCACTGTAGTTGTTGGGAAGCACCCTCCTCCAAAATCCAAATCTGTTCAAGTTGCTATTGCATGA 480 0.4521 MSRVGDSLNVDLAAAVNNLFNIPETMEKFMFPSSRAHDHHENRGVSSIIPVDILDTAKEFIFFMDVPGLSKSEIQVTVEDEKTLVIRSNGKRKRHDGDDEGCKYLRLERRGPQNLLRKFRLPENADVSAITAKCENGVLTVVVGKHPPPKSKSVQVAIA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00405 159 FunFam 17.4 kDa class III heat shock protein isoform A 9 157 - -
Vian9g00405 159 Gene3D - 10 158 IPR008978 -
Vian9g00405 159 SUPERFAMILY HSP20-like chaperones 27 158 IPR008978 -
Vian9g00405 159 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 159 IPR002068 -
Vian9g00405 159 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Vian9g00405 159 CDD ACD_sHsps-like 52 145 - -
Vian9g00405 159 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 156 IPR031107 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00405 K13993 - gmx:100803161 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00405 9 3931922 3932520 Vian9g00405 9 3931922 3932520 ECH