Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00390 ATGAGCATCTTGCAAGGGAAACGGAAGCGCCAAGACCTGGCTTCTGCACTCTCTGCGTCGATGACGAACGAGGAGCGGGTGATTTACAATATCATTCGCGGGAAGAAGGAGATGGGGATATGGCAAGGGGACATCAAAAGAGAAACCAACATCCCTGACAGCATATTGAAGAAATCGATCAAGTTGCTAATCTCCAAGACTCTTATCAAGGAAGTTGTGAACATCCAAAACAAGTCCAAGAAGGTGTTGATGGCCATGGAATTCGAGCCCTCTAAGGAGATCACTGGTGGAGAGTGGTATACCGAAGGCAGGCTCGACACACAGCTCATCGATGCTCTGTCTGATGTCTGCTTGAAGCTTATTTCTCGGAAAAAGATCGCTACCCGCGATGCAATCCTCGAGTGGACTAGAACCTTAGGAAATGAGGTTTTTCCTGGTGGAGTCAGTCCAGGACAGGTGGAACAAATTTTGAAAGTTTTGGTTATGGAAAATAAGTTACAAGAGGTGAACAGCACTGGCTTTGGGGATTTTTCATCTGTTCCTGCTGGTGAAGTTTGTTTTAGGTTGGCGAAAAAGGTAGGCACCAATGTTAAAGTTGGTGCCATGGCTTCTATTCCTTGTGGGGTTTGTCCTAGGATTAAATTTTGTACACCCAATGGTATTATATCCCCAACAAATTGTCAGTATTATCAGAAATGGTTGGACTTTTAA 711 0.4473 MSILQGKRKRQDLASALSASMTNEERVIYNIIRGKKEMGIWQGDIKRETNIPDSILKKSIKLLISKTLIKEVVNIQNKSKKVLMAMEFEPSKEITGGEWYTEGRLDTQLIDALSDVCLKLISRKKIATRDAILEWTRTLGNEVFPGGVSPGQVEQILKVLVMENKLQEVNSTGFGDFSSVPAGEVCFRLAKKVGTNVKVGAMASIPCGVCPRIKFCTPNGIISPTNCQYYQKWLDF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00390 236 SUPERFAMILY "Winged helix" DNA-binding domain 18 87 IPR036390 -
Vian9g00390 236 Gene3D - 3 80 IPR036388 -
Vian9g00390 236 FunFam DNA-directed RNA polymerase III subunit RPC6 22 87 - -
Vian9g00390 236 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 18 236 IPR016049 -
Vian9g00390 236 Pfam RNA polymerase Rpc34 subunit 18 130 IPR007832 GO:0005666|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00390 Vian-Chr9 3776043 3776753 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00390 K03025 - gmx:100789276 332.413