Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00381 ATGAGAACCCCTTTTGTCGGATTCAGCAGTATACTAGTGCTTCTTGTTTTCGTCTCTGCTTCCTGTTTTTCTACCCATGGAAGTTTGGAAATGGAGAAAACTTTGGCGATTATAAAACCAGACGGATTAATCGGTAACTACACTGATGATATCAAGAGAACAATTGTAGAATATGGTTTCAGCATTTTTAAGGAAAAGATTGTTCAACTTGATCAAGCCACTGTAGAAAAGTTTTATGCTGAGCACTCTTCAAAATGTTTCTTTTCCAGGTTTATAAAATACATGACAAGTGGACCAGTGTTGGTTATGGTCTTGGAGAAGGATAACGCTATTGCTGATTGGCGTGCTTTAATGGGCCCTACTGATGCAAGCAAAGCTAAGATTACTCACCCTCACAGCATCAGAGCAAAATGCGGATTGGATATAGAAAGGAATTGTGTTCATGGTTCAGACTCTCCTAAATCTGCACAAAGAGAGATTCCATTTTTCTTTCAGGAGCTGTCCGCAGGTCAATAA 516 0.3934 MRTPFVGFSSILVLLVFVSASCFSTHGSLEMEKTLAIIKPDGLIGNYTDDIKRTIVEYGFSIFKEKIVQLDQATVEKFYAEHSSKCFFSRFIKYMTSGPVLVMVLEKDNAIADWRALMGPTDASKAKITHPHSIRAKCGLDIERNCVHGSDSPKSAQREIPFFFQELSAGQ 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00381 171 PRINTS Nucleoside diphosphate kinase signature 98 115 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vian9g00381 171 PRINTS Nucleoside diphosphate kinase signature 145 164 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vian9g00381 171 PRINTS Nucleoside diphosphate kinase signature 34 56 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vian9g00381 171 PRINTS Nucleoside diphosphate kinase signature 78 97 IPR001564 GO:0004550|GO:0006183|GO:0006228|GO:0006241
Vian9g00381 171 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Vian9g00381 171 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 9 168 - -
Vian9g00381 171 SUPERFAMILY Nucleoside diphosphate kinase, NDK 30 167 IPR036850 -
Vian9g00381 171 SMART ndk_5 31 171 IPR034907 -
Vian9g00381 171 Gene3D - 26 170 IPR036850 -
Vian9g00381 171 ProSitePatterns Nucleoside diphosphate kinases active site. 145 153 IPR023005 -
Vian9g00381 171 FunFam Nucleoside diphosphate kinase 28 169 - -
Vian9g00381 171 Pfam Nucleoside diphosphate kinase 32 166 IPR034907 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00381 K20790 - gmx:100500470 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00381 9 3663612 3665304 Vian9g00381 9 3663612 3665304 ECH