Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00378 ATGGCAACTGCAACCATGGCTACTGCAGCTGGTGCAGCTGCCCTTCTGTATTACACATTGAATCGGAAATTGCAGACTCAGGATGCGATAGATGAAGATGTTGAAGAAAATGGAAGTGAAACGACCACTGATACGCCATTAGGTAGTGCTCGTGTTTCTCATCCGTTAATCCAAGCCCCTGGAACATGGTTAGAGACAATTTCAACGTTATCTGAGACTCTCAGGTTCACGTATTCGGAGACGCTTGGGAAATGGCCAATTGGGGACTTGGCGTTTGGTATCAGCTTTCTGCTCAAGAGGCAGGGGAACTATCAAGTTGCCAGTGAATTCTGTGGTAAGGATAGTGTACAGCTGAAAGGATCTGAGATTACTGCCGAACTTAAGTATCTCTTGAACTTGTTGACCCTGTGCTGGCATTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGAAGAAACTGGCTACACTGAAGAAAATGTCCTCCTTCGGGAAGCCAAAGCAGGAATTTTGAAACCAGCTTTTACGATTATCGTTGATCATGACATGAGATGCCTTTTGCTGTTGATTCGTGGCACACATAGTATCAAAGATACTCTAACAGCTGTTACAGGAAATGTAGTACCATTCCATCACACTGTTGTTCACCAAGGGGGGGTTAGAGATTTGGTTTTAGGTTATGCCCACTGTGGAATGGTTGCTGCTGCTAGATGGATTTCAAAGCTTGCAACTCCTTGTCTCCTTGAAGCACTTGGCCACTACCCTCATTATAAAGTCAAGATTGTTGGGCACTCTTTGGGTGGAGGTACTGCAGCAATTCTAACTTATGTGTTGAGAGAGAGAAAGGAACTGTCTGTCGCTACATGTGTTACATTTGCTCCAGCTGCTTGTATGACATGGGAGTTGGCAGAGTCGGGTGATAGTTTTATCACTTCTATTATAAATGGAGCTGATTTGGTGCCTACATTCTCAGCTGCTTCTGTAGATGACTTGCGTTCTGAGGTGACAGCATCAGCATGGATAAATGACTTGAGGAATCAAATTGAACAAACAAGAATACTTAGTACTGTCTATCGCTCTGCTTCAGCATTAGGTTCTCGCCTCCCATCGATTGCCACTGCTAGAGCAAAAGTTGCTGGGGCTGGGGCCATTTTGCAGCCAGTTTCTAATGGTACCCAGGTTGTGATGAAGAGAGCCAAGAGTATGGCAGCATGGGCACGTCCAAACCTTAATTTGTCCTCTTGGTCATGCATGGGACCCCGTCGCAGAGCCTTGAGTGCTTATTCAAACTCCAAAGACGGCGATAGTCCTCCTACATCTTCCTCTATCAACATTGACAGTTCCGATTCACTTCTTCGTTCTCCCAAGAAGGCGATTAATGCAAAGAATATGAACCTTCCTGTATCTTCATCTATAGAAGAGTGGTCTTCTGAGATTGAATGTGGAAATGAAAGTAGTTCTGATACTGAGGTGGGTGTTGATCATGGTGACCGTCAGATGGACCATGACAGATATGATGATCAGATGAGTGAAGTGGAGTTGTGGCATCAACTGGAGAATGAGCTGTATGACGGTCCTGAAGTTGAGGAGACTGATGTTGTAAAGGAGATAAGGGAAGAGGAAGCAACCCACGAAGTAGAGGAAGCCCAGAGTTCAGTACCAGAAACGAAAGAAGTCTACAGATTTTTCCCTCCTGGAAAGATAATGCACATTGTTACACTCCAGTCTGACACGGACCATGAAAATGATGATAGCCCAACCTATGCAAGTTCAGACAGTAGCGAGCTAGATGAGACTAAGATTGGGATTTTTCTAACTTCCAGGTCTCTGTATAGTAAACTTAGACTCTCACAGAGAATGATCAGTGATCACTTCATGCCAGTTTATAGAAGGCAGATTGAAAGGCTAATAAAAGAACTTGAGCAGGAAGCTACTGAGGACCATGATACACAAGAGGTGGTGTTATAG 1962 0.4434 MATATMATAAGAAALLYYTLNRKLQTQDAIDEDVEENGSETTTDTPLGSARVSHPLIQAPGTWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLKRQGNYQVASEFCGKDSVQLKGSEITAELKYLLNLLTLCWHFSKKPFPLFLEETGYTEENVLLREAKAGILKPAFTIIVDHDMRCLLLLIRGTHSIKDTLTAVTGNVVPFHHTVVHQGGVRDLVLGYAHCGMVAAARWISKLATPCLLEALGHYPHYKVKIVGHSLGGGTAAILTYVLRERKELSVATCVTFAPAACMTWELAESGDSFITSIINGADLVPTFSAASVDDLRSEVTASAWINDLRNQIEQTRILSTVYRSASALGSRLPSIATARAKVAGAGAILQPVSNGTQVVMKRAKSMAAWARPNLNLSSWSCMGPRRRALSAYSNSKDGDSPPTSSSINIDSSDSLLRSPKKAINAKNMNLPVSSSIEEWSSEIECGNESSSDTEVGVDHGDRQMDHDRYDDQMSEVELWHQLENELYDGPEVEETDVVKEIREEEATHEVEEAQSSVPETKEVYRFFPPGKIMHIVTLQSDTDHENDDSPTYASSDSSELDETKIGIFLTSRSLYSKLRLSQRMISDHFMPVYRRQIERLIKELEQEATEDHDTQEVVL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00378 653 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 643 - -
Vian9g00378 653 Pfam Lipase 3 N-terminal region 51 130 IPR005592 GO:0016042
Vian9g00378 653 MobiDBLite consensus disorder prediction 427 448 - -
Vian9g00378 653 Coils Coil 624 648 - -
Vian9g00378 653 CDD Lipase_3 177 322 - -
Vian9g00378 653 Gene3D alpha/beta hydrolase 148 359 IPR029058 -
Vian9g00378 653 SUPERFAMILY alpha/beta-Hydrolases 146 323 IPR029058 -
Vian9g00378 653 MobiDBLite consensus disorder prediction 425 448 - -
Vian9g00378 653 Pfam Lipase (class 3) 186 323 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00378 Vian-Chr9 3622733 3627810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00378 15 641 Acyl Lipid Metabolism Gene Families AT3G14075 63.608 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00378 - - gsj:114390808 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00378 9 3622733 3627810 Vian9g00378 9 3622733 3627810 ECH