Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00361 ATGGTGGAAGGTCAAATCACTGCTGGTTTTATGACACCATTTGCAGTTTATACGAAGACACTAAAACCAGGAGATGTAATGGTTTTCCCACAAGGACAACTGCATTTTCAAGTGAACTCTGGAAAGGGAAAAGCCACTGCATTTCTGGCTTTCAGTAGCGCCAACCCTGGAGCACAACTACTTGACCTTTTGTTGTTTGGTAATAGCTTACCTTCTGACGTGATTGCACAAACTACTTTCCTTGACGTTGCCCAAGTGAAGAAGGTTAAGGGACGTTTTGGTGGCAGAGGCTAG 294 0.4422 MVEGQITAGFMTPFAVYTKTLKPGDVMVFPQGQLHFQVNSGKGKATAFLAFSSANPGAQLLDLLLFGNSLPSDVIAQTTFLDVAQVKKVKGRFGGRG 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00361 97 SUPERFAMILY RmlC-like cupins 2 94 IPR011051 -
Vian9g00361 97 SMART Cupin_1_3 1 87 IPR006045 -
Vian9g00361 97 Gene3D Jelly Rolls 1 96 IPR014710 -
Vian9g00361 97 PRINTS Germin signature 19 39 IPR001929 GO:0030145
Vian9g00361 97 PRINTS Germin signature 52 67 IPR001929 GO:0030145
Vian9g00361 97 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 1 88 - -
Vian9g00361 97 Pfam Cupin 2 87 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00361 Vian-Chr9 3407934 3408227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00361 1 97 Miscellaneous Gene Families AT1G72610 59.184 1.37e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00361 - - gmx:100783206 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00361 9 3407934 3408227 Vian9g00361 9 3407934 3408227 ECH