Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00341 ATGGCGGAAAGCGCATCACCGTCGTCCAAACCCTCATCATTGGACCCTCAAAACCCCGCACCATCCTCCAACCCTACAATCCCTTCCCCTTCCCACAACAACACAGCTTCACCCTCGCTCCTTCTGCTCCCCCAAGACCAGAGAAAACCTGTTATTGTCGATGATTGTTTAAAGAGGAGAAACAGGGATAATTGTGAAGGAAGCCCGTCACATAACAGTGAACTGAGGACAATGTCTGCTGAATCGCCAAGTTCTGTTCGTAAAGTGGTTGTTCATCTCAGAGCCACCGGTGATGCTCCTATACTCAAGCAATCCAAGTTCAAGATAGCAGGAACTGATAAATTCGTTAAAGTGATAGACTTTCTCCGACGGCAGCTCCACAGGGAGACATTGTTTGTTTATGTCAATAGTGCTTTTTCACCAAACCCTGATGAATTGGTCATTGATCTATTTAATAATTTTGGTTTTGATGGGAAACTGGTGGTCAACTACGCTTGCTCCATGGCGTGGGGCTAA 516 0.4632 MAESASPSSKPSSLDPQNPAPSSNPTIPSPSHNNTASPSLLLLPQDQRKPVIVDDCLKRRNRDNCEGSPSHNSELRTMSAESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFVKVIDFLRRQLHRETLFVYVNSAFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00341 171 MobiDBLite consensus disorder prediction 27 42 - -
Vian9g00341 171 FunFam Ubiquitin-like protein ATG12 82 171 - -
Vian9g00341 171 MobiDBLite consensus disorder prediction 1 20 - -
Vian9g00341 171 Pfam Ubiquitin-like autophagy protein Apg12 88 171 IPR007242 GO:0000045|GO:0005737
Vian9g00341 171 SUPERFAMILY Ubiquitin-like 87 170 IPR029071 -
Vian9g00341 171 Gene3D - 82 171 - -
Vian9g00341 171 CDD Ubl_ATG12 88 170 - -
Vian9g00341 171 PANTHER AUTOPHAGY PROTEIN 12 78 171 IPR007242 GO:0000045|GO:0005737
Vian9g00341 171 MobiDBLite consensus disorder prediction 1 44 - -
Vian9g00341 171 MobiDBLite consensus disorder prediction 60 81 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00341 K08336 - gmx:100527733 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00341 9 3256770 3261986 Vian9g00341 9 3256770 3261986 ECH