Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00336 ATGGCGGAAAGCGCATCACCGTCGTCCAAACCCTCACCAATGGACCCTCAGAACCCCGCACCATCCTCCAACCCTACAATCCCTTCCCCTTCCCACAACAACATGCCTTCACCTTCGCTCCCTCCGCTTCCCCAAGACCAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAAAATCTTCATCAACAGTTGAGTCCGCCTCAACAACAACAGCCTCTCGTGTCGTCGCAAGCCATGAACACCATCAACGGCATCAACCCTATCTCCAATTTCCAACTCCAGCAGACGCTGCAGCGATCGCCTTCCATCTCGCGCCTCAATCAAATCCAGCCTCAGCAGCAGGCGCAGCAGCAGCAGCAGTTCGGCGTCATGCGCCAGCAGGCCGGATTGTACGGCGGACAGATGAGCTTTGCTGCCGCTGGTGGCGGAGCGGGCCAGCAGCAGCAGTTGGGCGGCTCCAATTTGTCGCGGTCCGCGCTGATAGGGCAGAGCGGACACTTCCCCATGTTGTCTGGTGCTGGCTCGCAGTTTAACTTGCTCTCCTCGCCAAGGCAAAAAGGTGGGCTAGTTCAGCAGTCTCAGTTCTCAGGTAATTCTGCTGGACAGTCTCTGCAAGGAATGCAAGCAATGGGTATGATTGGAACACCAAATCTCACCTCTCAACTGCGAGCTAATGGAGCCCTTGCTTATGCACAGCAGCTGCGAATGGGTCCGGGTCAAATCAGGCAGCAGATGTCTCAGCAAAGTTCACTAACTGGACAGGTTCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAACTCTCAGTTGTCTGGGTTGTCTCAGAATGGGCAACCAGGGATGGTTCATAACTCCTTAACACAGCAACAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCTCACCATTGCGTCTTCAACAGCAGCAGAGGCAGCCGTTGGCTTCTTCTACTCAATTGCAACAAAACTCTATGAGCCTGAACCAGCAACAATTGTCCCAGCTGATTCAGCAACAGAAATCGATGGGGCAGTCTCAGCTGCATCAGCAGCAGCAGCAGCACCAGCCTCAACAACAGCTGCAACAACAGCTCTTACATCAGCAGCCACAACAACAGTCTCAGCCACAGGCTTCTGTCCATCAACAGCAACAGTCTCCAAGGATGCCAGGAACTGCAGGCCAAAAGTCATTCAGTCTAACAGGATCACAGCCAGACGCTACTGCATCTGGTGCAACTACACCAGGTGGTAGTTCTAGCCAAGGAACAGAAGCAACAAACCAAGTTCTTGGGAAGAGAAAGATACAGGATTTAGTTGCACAGGTGGATCCACAAGGTACACTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGACTCTACAACTACACACGGTTGCATTTTGGCAAAACATAGAAAATCATCAACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTAACAATTCCAGGATATTCAAGTGAAGAGAAGAAGTATCAAAGCAAACCTCAATTAAATGACCTTCACAAGAGGCGCCTGGATATGATTCGCACAATGATGGAATCTTCGGCCTCTGAGTCAAATATTAATAGTTCTAAAGAGTTGAGTAGACAGGGCATTTCAAATCCTACCCCTATGGGAGCTCACCATCTAGTAAGACCCATGAGTTCAGAGCAGTTGGTTTCTCAGGCAGCTGGTTCTCAAATGCTACAGCAGATGACAAGGTTTTAA 1776 0.5023 MAESASPSSKPSPMDPQNPAPSSNPTIPSPSHNNMPSPSLPPLPQDQQQQQQQQQQQQQQQNLHQQLSPPQQQQPLVSSQAMNTINGINPISNFQLQQTLQRSPSISRLNQIQPQQQAQQQQQFGVMRQQAGLYGGQMSFAAAGGGAGQQQQLGGSNLSRSALIGQSGHFPMLSGAGSQFNLLSSPRQKGGLVQQSQFSGNSAGQSLQGMQAMGMIGTPNLTSQLRANGALAYAQQLRMGPGQIRQQMSQQSSLTGQVQGLPRSSSLAFMNSQLSGLSQNGQPGMVHNSLTQQQWLKQMPAMSGPASPLRLQQQQRQPLASSTQLQQNSMSLNQQQLSQLIQQQKSMGQSQLHQQQQQHQPQQQLQQQLLHQQPQQQSQPQASVHQQQQSPRMPGTAGQKSFSLTGSQPDATASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGTLDPEVIDLLLELADDFIDSTTTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYQSKPQLNDLHKRRLDMIRTMMESSASESNINSSKELSRQGISNPTPMGAHHLVRPMSSEQLVSQAAGSQMLQQMTRF 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00336 591 CDD TAF12 434 502 IPR003228 GO:0005669|GO:0006352
Vian9g00336 591 FunFam Transcription initiation factor TFIID subunit 12 429 504 - -
Vian9g00336 591 MobiDBLite consensus disorder prediction 536 558 - -
Vian9g00336 591 MobiDBLite consensus disorder prediction 536 565 - -
Vian9g00336 591 MobiDBLite consensus disorder prediction 1 78 - -
Vian9g00336 591 MobiDBLite consensus disorder prediction 44 78 - -
Vian9g00336 591 MobiDBLite consensus disorder prediction 307 433 - -
Vian9g00336 591 SUPERFAMILY Histone-fold 432 503 IPR009072 GO:0046982
Vian9g00336 591 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 67 549 IPR037794 GO:0000124|GO:0005669|GO:0046695
Vian9g00336 591 Gene3D Histone, subunit A 429 504 IPR009072 GO:0046982
Vian9g00336 591 Pfam Transcription initiation factor TFIID subunit A 435 502 IPR003228 GO:0005669|GO:0006352
Vian9g00336 591 MobiDBLite consensus disorder prediction 300 433 - -
Vian9g00336 591 MobiDBLite consensus disorder prediction 12 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00336 Vian-Chr9 3213117 3220089 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00336 K03126 - gmx:100783017 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00336 9 3213117 3220089 Vian9g00336 9 3213117 3220089 ECH