Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00334 ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCGCCTGCAGAGGATAATGATGATAGAGATGGTATTGTCTGCATCCAGCCCCAAAAGACACACCCATCGGCAAATCCCCATGCTTCTGAATTATTTGCAACATCAACTGCATCCCAAGGAATAGTAAATAATCATGCTTTTTCACATGCCTCATCTGTCTCTGGATTTCAACCTTTTGTTCGGCCTAAATCCACTGGTGTGCCTGAATCAGATGCTGAATTGAAGAGAGCAGGAGACCAGGACACAAAAGTTTCCTCAAAGTCAAGTAAAGATGAAGATGTGAAGGTTATAGATTCACTGATTCAAAGTTCAACAAATGCCCAACCTACTGAGAGGGAAGAAGGGGAATGGTCTGATGAGGACGTGTTTGCTAATGCAAATGGAGGTAATAATGCTAATGCAAATGGAGGTAGTAATGCTAATGCAAATGTAGGGAATAATTTGCCACAGCGAAGTCAAGCTTCAGAAGAGGTAGCAGCATCTGGAATGGTGGATGGGGGTGTTGTGGTTGCTTCTGACGGTAAGCATAGAAATCTTAAGAGTTCTGATAGTATAAATGATGAAAAGGGTAGTCATGCTTCTATAGGTCTAGAATCAAATTCGAGTGAGCAGAAAAGCAATAGTATTCCAAATTCAGAAAGCAATATAAAAAGTGAAACCTCTACTGATGCACTGGAGGAACCCGCTTTAGTTCCCAAGCAAAAAGAAGTGAAAGGTATTGAAGCAAGTCATGCGCTTAGGTGTGCAAATAATCCAGGGAAGAGGAAGATTGACCAACGTAAAGAGGAAATGTTGGGAAAGAAACGTAATAGACAGACAATGTTTCTTAACTTAGAGGATGTTAAGCAAGCAGGTCCTATTAAAACCTCAACCCCTAGAAGGCAGAATTTCTCGTCATCTGTTGTAAGTCGTACAATAAAGGAAGTCCGCACTATTCCTGCACAAGTTGAGCGTGTTGGAATAGCTAAGGATCAGAAGCTCACTGAGACTACTTCTGGTGAAGGTAGCAACCATGCTGAAGCACACGAACCTAAATCTGATTGTAATGGCGATACTACTGGACCACTTGTTAGATCCAGGAGGTTAAACAGTGAGACAGAACCTCCTGCAGAGGCCAATTTACCACCCATTCCGAGACAGGGTTCATGGAAACAATTGACAGATTCAAGGCAGCAGAAAAACACTCTCCATTCTAATAGGAAGTTGGGATTGAGTGGTCAAAGTTCCAATGATGTTAAGTTAGGAAACAAGAAACATCTTTCTATCAAGAAGCAGACTCCTATCAACAACCAGTCCCAGGACACATCTGTTGAACGTCTTATACGGGAGGTGACCAGTGAAAAGTTTTGGCATCACCCAGAGGATACTGAGCTTCAGTGTGTTCCTGGACGGTTTGAATCAGTGGAAGAGTATGTTAGAGTATTTGAACCTTTGCTTTTTGAGGAATGCCGTGCTCAACTTTACAGTACTTGGGAAGAGTCAACAGAAACAGTGTCAAGGGATACTCATATTATGGTGCGAGTGAAGGCGAATGAGTCAAGGGAAAGAGGGTGGTATGATGTTAAAGTTCTTCCAGTACATGAGTTCAAATGGTCATTTAAGGAGGGTGATGTTGCAATTCTTTCATCCCCCAGGCCTGGATCAGTTAGATCCAAGCAGAACAATTTATCTGTAGCTCAGGATGACGGGGAATCTGAAGTCACGGGACGAGTGGTTGGTACGGTTAGGCGTCACATACCTATTGATACCCGTGATCCTCCTGGTGCTATTCTTCATTACTATGTTGGAGACTCTTATGATCCCAGCAGGGTTGATGATGACCATATCATAAGAAAGCTTCTAAGTGGAAGCATCTGGTACCTCACCGTTCTTGGTTCTCTTGCCACCACACAACGGGAGTATGTTGCCCTACATGCATTTCGTCGATTAAATTTGCAGATGCAAAGTGCAATCCTTCAGCCTAGTCCCGAACACTTCCCTAAATACGAGCAACAGACCCCAGCCATGCCCGAATGCTTCACACAGAACTTTGTTGAGTATCTACGTAGGACCTTCAATGAACCCCAGTTGGCAGCAATCCAATGGGCAGCTACCCACACAGCTGCTGGCACAAGTAGTGGATCAACTAAAAGGCAAGAACCTTGGCCATTTACCCTTGTTCAAGGACCTCCAGGAACAGGAAAAACACATACAGTGTGGGGAATGTTGAATGTCATTCACCTTGTTCAGTATCAGCACTACTACACCTCTTTACTAAAGCATGTGGCCCCTGAGAGCTACAAGCAAGTCAATGAGATTAATTCAGATAATGTCCCCACTGGATCTATTGATGAAGTTCTTCAAAACATGGACCAGAATCTCTTGCGAACCTTACCTAAACTGGTCCCAAAACCTAGAATGTTAGTCTGTGCTCCATCTAATGCTGCCACTGATGAGCTTCTTGCTCGTGTTCTGGATCGTGGATTTATTGATGGGGAGATGAAAGTTTATCGACCAGATGTGGCTCGAGTAGGGGTTGATTCTCAGACACGTGCTGCCCAAGCAGTATCTGTTGAGCGTAGAACTGAACAGCTTTTAATCAAGAGTCGGGAAGAAATTATGGGATGGATGCACCAGTTAAAGAATCGTGAGGCACAGCTGACTCAGCAGTTGCATTGTCTCCACAGAGATCTTAATGCTGCTGCTGCTGCTGTTCGTTCCCAAGGATCTGTTGGTGTTGATCCTGACCTTCTCATGGCCCGAGATCAGAATCGAGATGCTTTGCTACAGAGCCTTGCTGCTGTGGTTGAAAACCGGGACAAGGTTTTGGTTGAGATGTCTCGCCTAGCCCTTCTTGAAAGTAGGTTTCGACCTGGTAGTGGATTTAATTTGGAAGAAGCCCGTGCTAGTTTGGAGGCCAGTTTTGCAAACGAAGCAGAGATTGTTTTCACTACAGTTTCTAGCAGTGGCCGGAAGTTGTTTTCTCGCCTTTCCCATGGTTTTGATATGGTGGTCATTGATGAGGCAGCCCAAGCCAGTGAGGTGGCAATTCTGCCTCCCCTCTCTCTCGGTGCAGCTCGATGTGTTCTTGTTGGAGATCCTCAGCAGCTTCCTGCTACAGTTATAAGCAAGGCTGCTGGAACATTGATGTACAGTAGGAGTCTTTTTGAAAGGTTCCAGCAAGCAGGTTGCCCGACAATGTTGCTGTCTGTGCAGTATAGAATGCACCCTCATATTCGGGATTTCCCTTCTAGGTACTTCTATCAGGGGCGCCTTACCGATAGTGAAAGCGTGGCTAAACTGCCTGACGAGCCATACTACAAGGACCCTTTACTTAAACCTTACCTATTCTATGATATCAGACACGGGCGCGAGTCTCACAGAGGTGGATCAGTCTCTTATCAAAACATACATGAAGCACAATTTTGTCTCAGATTGTATGAGCATGTTCAGAAGACAGTCAAATCTCTGGGTCTAGGAAAAATTACTGTTGGCATAATTACTCCATATAAGCTGCAATTGAAATGCCTCCAGCGTGAGTTTGACGAAGTCTTAAATTCAGAAGAAGGGAAGGATCTATATATCAATACAGTAGATGCTTTCCAAGGTCAAGAACGAGATGTCATTATAATGTCCTGTGTGCGTGCATCTAGTCACGGTGTTGGTTTTGTTGCAGATATTCGTCGGATGAATGTTGCCCTTACACGTGCAAGAAGGGCCCTTTGGGTCATGGGAAATGCGAATGCTCTGGTGCAATCTGAAGATTGGGCTGCATTGATTAATGATGCTAAATCTCGAAATTGCTATATGGATATGGACTCTCTTCCTAAAGACTTCCTGGTGTCCAAGGGACCTGTTTACACATCATTGCCCGGTAAGCCTTCATCAAATATGAGGGGCATGAGATCAGGTGGACCAAGATATAGATCAATGGATATGCATATGATGGAGTCCAGGTTGGGAGCACCATCTGAAGATGACGAGAATATGGGTGCTCCAATTGGCTCGAGAAATGGGAACCATCGCCAATCACGGTTTTCAATGGAGAACTCCATAGATGATTTTGATCACGGGGGTGACAAATCCAGAGATGCTTGGCAGTATGGTATACAGAAGAAGCAGAACTCATCTGGACCCATGGGAAAGAGAGACGTATAA 4176 0.4449 MGSRGRPLFDLNEPPAEDNDDRDGIVCIQPQKTHPSANPHASELFATSTASQGIVNNHAFSHASSVSGFQPFVRPKSTGVPESDAELKRAGDQDTKVSSKSSKDEDVKVIDSLIQSSTNAQPTEREEGEWSDEDVFANANGGNNANANGGSNANANVGNNLPQRSQASEEVAASGMVDGGVVVASDGKHRNLKSSDSINDEKGSHASIGLESNSSEQKSNSIPNSESNIKSETSTDALEEPALVPKQKEVKGIEASHALRCANNPGKRKIDQRKEEMLGKKRNRQTMFLNLEDVKQAGPIKTSTPRRQNFSSSVVSRTIKEVRTIPAQVERVGIAKDQKLTETTSGEGSNHAEAHEPKSDCNGDTTGPLVRSRRLNSETEPPAEANLPPIPRQGSWKQLTDSRQQKNTLHSNRKLGLSGQSSNDVKLGNKKHLSIKKQTPINNQSQDTSVERLIREVTSEKFWHHPEDTELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEESTETVSRDTHIMVRVKANESRERGWYDVKVLPVHEFKWSFKEGDVAILSSPRPGSVRSKQNNLSVAQDDGESEVTGRVVGTVRRHIPIDTRDPPGAILHYYVGDSYDPSRVDDDHIIRKLLSGSIWYLTVLGSLATTQREYVALHAFRRLNLQMQSAILQPSPEHFPKYEQQTPAMPECFTQNFVEYLRRTFNEPQLAAIQWAATHTAAGTSSGSTKRQEPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKHVAPESYKQVNEINSDNVPTGSIDEVLQNMDQNLLRTLPKLVPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSVERRTEQLLIKSREEIMGWMHQLKNREAQLTQQLHCLHRDLNAAAAAVRSQGSVGVDPDLLMARDQNRDALLQSLAAVVENRDKVLVEMSRLALLESRFRPGSGFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLSHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLPATVISKAAGTLMYSRSLFERFQQAGCPTMLLSVQYRMHPHIRDFPSRYFYQGRLTDSESVAKLPDEPYYKDPLLKPYLFYDIRHGRESHRGGSVSYQNIHEAQFCLRLYEHVQKTVKSLGLGKITVGIITPYKLQLKCLQREFDEVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASSHGVGFVADIRRMNVALTRARRALWVMGNANALVQSEDWAALINDAKSRNCYMDMDSLPKDFLVSKGPVYTSLPGKPSSNMRGMRSGGPRYRSMDMHMMESRLGAPSEDDENMGAPIGSRNGNHRQSRFSMENSIDDFDHGGDKSRDAWQYGIQKKQNSSGPMGKRDV 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00334 1391 PANTHER DNA2/NAM7 HELICASE FAMILY 280 1330 IPR045055 -
Vian9g00334 1391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 697 1282 IPR027417 -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 137 170 - -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 206 235 - -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 336 426 - -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 1353 1373 - -
Vian9g00334 1391 Gene3D - 1079 1285 IPR027417 -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 1 24 - -
Vian9g00334 1391 FunFam P-loop containing nucleoside triphosphate hydrolase 1079 1285 - -
Vian9g00334 1391 Coils Coil 883 903 - -
Vian9g00334 1391 CDD SF1_C_Upf1 1081 1270 IPR047187 -
Vian9g00334 1391 Gene3D - 634 1078 IPR027417 -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 81 110 - -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 65 249 - -
Vian9g00334 1391 CDD DEXXQc_SETX 698 1080 - -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 1327 1391 - -
Vian9g00334 1391 Pfam AAA domain 698 1050 IPR041677 GO:0004386
Vian9g00334 1391 Pfam AAA domain 1057 1253 IPR041679 -
Vian9g00334 1391 MobiDBLite consensus disorder prediction 393 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00334 Vian-Chr9 3190469 3196460 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00334 - K10706 gmx:100794516 2527.67