Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00328 ATGAGTTTTCTGTTCGGCAGTAGAAAGACTCCCGCTGAGCTTTTGAGGGAGAACAAAAGGATGCTGGACAAGTCCATTAGAGAAATAGAGAGGGAAAGACAAGGCTTGCAGAATCAAGAAAAGAAATTGATTGTCGAGATTAAGAAGAATGCCAAACAAGGGCAGATGGGGGCAGTGAGAGTGATGGCCAAGGATCTCATCAGGACTCGCCATCAGATTGAAAAGTTTTACAAGCTCAAATCGCAACTTCAGGGTGTTTCTTTGAGAATTCAGACGCTAAAATCCACTCAAGCAATGGGAGAGGCTATGAAAGGAGTTACTAAAGCAATGGGTCAAATGAATAGGCAGATGAATTTGCCTTCGCTACAGAGGATAATGCAAGACTTTGAAAGGCAGAATGAGAAGATGGAACTGGTTTCTGAGGTAATGGGAGATGCAATTGACGATGCTTTGGAAGGTGATGAAGAGGAGGAAGAGACAGAAGATCTTGTGAATCAGGTTCTTGATGAGATCGGAATTGATATCAACTCTGAGCTTTTGAATGCACCTGCATCAACCTCTGTCACTGCACCAGCGGCAAATAACAGGGTTGCTCAAGCTGAATCAACGGGTCATGAAGACAGTGGAATAGATGACGACCTACAGGCTAGGTTAAATAACCTGAGAAAAATGTGA 675 0.4341 MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQNQEKKLIVEIKKNAKQGQMGAVRVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQRIMQDFERQNEKMELVSEVMGDAIDDALEGDEEEEETEDLVNQVLDEIGIDINSELLNAPASTSVTAPAANNRVAQAESTGHEDSGIDDDLQARLNNLRKM 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00328 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 222 IPR005024 GO:0007034
Vian9g00328 224 Pfam Snf7 17 184 IPR005024 GO:0007034
Vian9g00328 224 MobiDBLite consensus disorder prediction 186 202 - -
Vian9g00328 224 Gene3D - 6 180 - -
Vian9g00328 224 MobiDBLite consensus disorder prediction 186 212 - -
Vian9g00328 224 Coils Coil 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00328 Vian-Chr9 3124022 3125988 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00328 K12191 - qsu:111998886 356.295