Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00316 ATGATTGGTATATCAGCTACAATGGAGGATAAAAGCGAGTTGAAAGAAGAGAAGAAATGGTGGAAAACATGGATAGAAAAAATGGGGAATTGGCTGGGAATTAACGTGAACAAGGATGAATGGCTGAAGGACATGAGAGGGAATCTGAGTTTGGCTGCAACCATAATCACAACAATGACCTTTCAAACTGCTATAAATCCACCAGGTGGTGTTAGACCAGCGAAAGAGACTGGACATGTCAAATGTAGAGGATCTGAAGATGGTAATCTATGCCCTGGTGAAGCAGTTCTAGCTGCACTTTACCCAACTGTGTATTACAGATTCCTTCTGTCCAACACTGTATGCTTCGTTTCATCCTTAGCTGTGTGCCTTTTGCTTGTGAGTGGCTTCCCTCTGAATCACAGATTTTTCACGTGGCTTCTGTCAATAGGCACCTGCATCACCATGACCAGCCTCGCTATGACCTACAAGCTTGCTGCAGATATGGTCACACCTGCTCCCGTCTGGGAAGCCAACGATACTACCGTCTTTGATAAAGTCATTTTCATTTGGCTTTCACTCCTAGGACTAGTCACACTTGTCCTTTTTCTGCGCTTCTTTGTTTGGATTTTCACTAAATTCATTGACAAACGTAAACCATGA 642 0.433 MIGISATMEDKSELKEEKKWWKTWIEKMGNWLGINVNKDEWLKDMRGNLSLAATIITTMTFQTAINPPGGVRPAKETGHVKCRGSEDGNLCPGEAVLAALYPTVYYRFLLSNTVCFVSSLAVCLLLVSGFPLNHRFFTWLLSIGTCITMTSLAMTYKLAADMVTPAPVWEANDTTVFDKVIFIWLSLLGLVTLVLFLRFFVWIFTKFIDKRKP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00316 213 PANTHER CASKIN 27 195 - -
Vian9g00316 213 Pfam Domain of unknown function 40 155 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00316 Vian-Chr9 3000943 3001584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00316 13 168 Miscellaneous Gene Families AT1G14480 29.299 3.30e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00316 - - gmx:100803370 260.766