Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00241 ATGTCTGGAATTGTGGTTGTTTTCGACTTTGACAAGACCATTGTCGATGTCGACAGCGACAACTGGGTCATCGACGAGTTGGGTTTCACAGATTTGTTCAACCAACTCCTTCCCACGATGCCTTGGAACACTCTCATGGACAAGATGATGATGGAGTTTCACACACATGGTAAAACCATTAAGGATATTGAAGAGGTTCTGCACAAGATTCCGTTGAACCCCAGAGTAGTACCCGCTATTAAAGCAGCTCATTCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCAAACTTGTTTTTCATTGAGTCAATTTTGAAGCACTTAGGAATAAGGGAATATTTCTCAGAGATCAATACTAACCCCAGTTATGTGAATGAAGAAGGAAGGTTAAGAATTCTACCTTACCATGATTTCAACAAAGCTTCTCATGGCTGCAGTTTGTGTCCTCCAAACATGTGTAAGGGTTTAGTGATAGAGAGAATTCAAGATTCAATATCAGAAGAGGATAAGAGGTTCATCTATCTTGGAGATGGAAGTGGAGACTATTGTCCAAGTTTGAGGTTGAAAGAGAAGGACTTTATGATGCCAAGGAAGAACTTTCCGGTGTGGGATTTGATATGCAGAGATCCTTCACTTATTAAGGCTGAGATTCATGGGTGGAGTGATGGAGAAGAACTTGAACAAGTTTTGCTGCACTTGATCAACAAAGTATCAATGGACCAAAATTTTCCCTTCATTTCCTCTGATTGCAAGCTTCAGACTCTGTCAGTCTCTGCTCATGAGGCTTTGCCCAAATTTCTACCAGTTCGACCATAG 816 0.4118 MSGIVVVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDKMMMEFHTHGKTIKDIEEVLHKIPLNPRVVPAIKAAHSLGCDLRIVSDANLFFIESILKHLGIREYFSEINTNPSYVNEEGRLRILPYHDFNKASHGCSLCPPNMCKGLVIERIQDSISEEDKRFIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICRDPSLIKAEIHGWSDGEELEQVLLHLINKVSMDQNFPFISSDCKLQTLSVSAHEALPKFLPVRP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00241 271 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Vian9g00241 271 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 240 IPR016965 GO:0016791
Vian9g00241 271 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Vian9g00241 271 Gene3D - 2 188 IPR023214 -
Vian9g00241 271 SUPERFAMILY HAD-like 4 189 IPR036412 -
Vian9g00241 271 NCBIfam HAD-IB family phosphatase 5 186 - -
Vian9g00241 271 NCBIfam MtnX-like HAD-IB family phosphatase 4 198 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00241 Vian-Chr9 2021833 2023676 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00241 K13248 - gmx:100782134 505.368