Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00240 ATGTCTGGAATCGTGATTGTTTTCGACTTTGACAAAACCATTGTCGATGTCGACAGCGACAACTGGGTCGTCGACGAATTGGGTTTTACCGATTTGTTCAACCAGCTTCTTCCGACCATGCCTTGGAACACTCTCATGGACACAATGATGATGGAGCTTCATTCAAATGGTAAAACCATTAAGGACATTGAAGAGGTTCTGCGTAAGATTCCCTTGCACCCAAGAGTAATACCTGCTATCAAGGCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCAAACACGTTTTTCATTGAGACTATTTTGAAGCATTTGGGAATTAGAGAGTATTTCTCAGAAATCAATACAAACCCCGGTTATGTGAATGAAGAAGGAAGGTTAAGGATTCTGCCTTACCATGACTTCAACAAAGCTTCCCATGGCTGCAATTTGTGTCCTCCAAACATGTGCAAGGGTTTAGTGATAGAGAGAATTCAAGATTCAATATCAGAAGAGGATAAGAAGTTCATCTATCTTGGAGATGGAAGTGGAGACTATTGTCCAAGTTTGAGGTTGAAAGAGAAGGACTTTATGATGCCAAGGAAGAACTTTCCGGTGTGGGATTTGATATGCAGAGATCCTTCACTTGTTAAGGCTGAGATTCATGGGTGGAGTGATGGAGAAGAACTTGAACAAGTTTTGCTGCACTTGATCAACAAAGTATCAATGGAGCAAAATTCTCCCTTCATTTCCTCTGATTGCAAACTTCAGACTCTGTCAGTCTCTGCTTTGGAGGCTTTGCCCAAAGTTCTACCAGTTCGGCCATAA 816 0.4191 MSGIVIVFDFDKTIVDVDSDNWVVDELGFTDLFNQLLPTMPWNTLMDTMMMELHSNGKTIKDIEEVLRKIPLHPRVIPAIKAAHALGCDLRIVSDANTFFIETILKHLGIREYFSEINTNPGYVNEEGRLRILPYHDFNKASHGCNLCPPNMCKGLVIERIQDSISEEDKKFIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICRDPSLVKAEIHGWSDGEELEQVLLHLINKVSMEQNSPFISSDCKLQTLSVSALEALPKVLPVRP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00240 271 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Vian9g00240 271 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Vian9g00240 271 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 241 IPR016965 GO:0016791
Vian9g00240 271 Gene3D - 2 188 IPR023214 -
Vian9g00240 271 SUPERFAMILY HAD-like 5 189 IPR036412 -
Vian9g00240 271 NCBIfam MtnX-like HAD-IB family phosphatase 4 198 IPR006384 GO:0016791
Vian9g00240 271 NCBIfam HAD-IB family phosphatase 5 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00240 Vian-Chr9 2018269 2019967 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00240 K13248 - gmx:100785878 518.85