Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian9g00212 | ATGAAGGTGCTTGTTCTGTTCGTTGCTACAGTTTTGGTAGCATGCCATGCCTCAGACTACCAAATGTACCCTCTCCGATTGAAAACTAGCCATGTTGGGCAGTACTCCACGGAGGTTTTATGCGCAAGTTGGAGGCTCGGCGTGGAAGCAAACAACCTCATCAAATGGAAAACTGTCCCAGAAGCATGCCAAGAGTTCGTAGCGGACTATGTTCTAGGCAACCAATATAGATCAGACTCCAAAACTGTTTGTCGTGAAGTTTATTTTTACGCCAAAACACTTAATATAACTGACAAAGACGTCTTTGTGTTCGACGTAGACGAGACTTTGCTCTGTAATCTCCAATATTATTCCAAGCATGGATTTGGGGTGGAGCGATTTAATGCTACAGCGTTTGCAAACTGGGTTGCTGAAGGAGAAGCATACGCACTACCCGAGACTCTTGTGCTGTACGACAAACTTATGTCTCTGGGCATCAAGGTTGTCTTCTTAACCGAAAGATTAGTATCTCAGAGAGCTATAACTGTTGCCAACTTAAAGGATGTTGGATTTGACAAATGGGAAAAGCTGATTCTGAAGGATCCAGCTGCATATACTGGGAAATCAACACTTACATACAAAGCAACTGAGAGAAGGAAGCTGGAGGAAAGTGGTTACAGAATCATTGGAAATGTTGGAGACCAATGGACAGATTTGATGGGAAGTTACAGAGGTTTAAGGACCTTTAAGCTGCCTAATCCCATGTACTACATTGGTTGA | 759 | 0.4321 | MKVLVLFVATVLVACHASDYQMYPLRLKTSHVGQYSTEVLCASWRLGVEANNLIKWKTVPEACQEFVADYVLGNQYRSDSKTVCREVYFYAKTLNITDKDVFVFDVDETLLCNLQYYSKHGFGVERFNATAFANWVAEGEAYALPETLVLYDKLMSLGIKVVFLTERLVSQRAITVANLKDVGFDKWEKLILKDPAAYTGKSTLTYKATERRKLEESGYRIIGNVGDQWTDLMGSYRGLRTFKLPNPMYYIG | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian9g00212 | 252 | CDD | HAD_VSP | 67 | 251 | - | - | |
| Vian9g00212 | 252 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 15 | - | - | |
| Vian9g00212 | 252 | Pfam | HAD superfamily, subfamily IIIB (Acid phosphatase) | 31 | 251 | IPR005519 | - | |
| Vian9g00212 | 252 | Gene3D | - | 37 | 252 | IPR023214 | - | |
| Vian9g00212 | 252 | SUPERFAMILY | HAD-like | 91 | 249 | IPR036412 | - | |
| Vian9g00212 | 252 | PIRSF | VSP | 1 | 252 | IPR014403 | - | |
| Vian9g00212 | 252 | PANTHER | ACID PHOSPHATASE-LIKE PROTEIN | 5 | 251 | - | - | |
| Vian9g00212 | 252 | NCBIfam | plant acid phosphatase | 36 | 251 | IPR010028 | GO:0003993 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian9g00212 | Vian-Chr9 | 1746460 | 1747418 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian9g00212 | - | - | gmx:100795218 | 362.844 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vian9g00212 | 9 | 1746460 | 1747418 | Vian9g00212 | 9 | 1746460 | 1747418 | ECH |