Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00198 ATGGACAGAAACCAATCCCGCAGGCAGGTTGCAGCAATGAAACAGTCCCTCTTTGATCAGGGGTTACTGGATGAACAGTTTATCCAACTGGAGGAATTGCAGGATGATGCAAATCCCAACTTCGTTGAGGAAATTGTCACTCTTCACTATCGTGATTCGAAAGAGAGGAACCCTCTGGATTTCAACAAGCTGGACACTCTCATGCATCAGTTCAAAGGAAGCAGCTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTTAGGGAATATTGCAGAGCAGGAAATGCTGAAGGCAATGATGCTATTGTATTTGCTTGGATATGCAGATGCATGAGGAGCTTCCAGCAGTTGAAGAAAGAATATGCTGCACTTAGAAAGAAACTTGAAGCTTATTTCCAGTTGGCAAGGCAAGCTGGACCCCAGGAAACTGCATGGTTCAGCTGTGTTGAAGTTCAAACCCTAGCCTGCGATTCGTGGTTCAAAGGAATGGCCTCATACAGGCCCTTCCCTCCGCAATCGAGTCAAATTCAAAACCCTATTCCAAGTGGGAATCATCAGTATACTAATAATAATCAAAATTGGGGTGCTTACGGAGATCCCTCTAATGCTTCATTTCCCCAAATCCCTCCAAATTCCAATTATCACCATCAGCAACAACAACATCAAAATCAACATCATGCTCCGTATGCACCTCCGAATCCCCATCACCCTCGCTATCCATATCCGCCACCACCTCCACCGCCACCGGAGGCTTCATACCAGCCTCCGCCGCCGCCACCTCCTCCCGTCTACTATCCCTCTAATAGCCAGTATAGCAACCAGCCACCTCCGCCACCGCCGCCGTCGTCGCCACCCCCACCACCCCCTCCTGTTTCACCCCCTCCTCCTCCCCCGGCAACTCAGAACAATGAAGAGCGGCGCTTCAAGGACCCTTCCACGTCCGGCCGCCGCGAATATGATCCTTCCAATCATGGCATTGCTCACAAGCAGCACAAGCACCAGCCTCCCGTGCCAGCAAAAAAGGTGAACGGGCCTCCTGGCAGAACTGAGACGGAGGAAGAAAAGAGGTTGAGGAAGAAGAGGGAGTTTGAAAAGCAGAGGCAGGAGGAAAAGCATAGGCAGCAGCTAAAGGAGTCCCAGAACACTGTTCTGCAGAAAACTCACCTGTTGTCGTCTGGGAAGGGGCATGGCATGATTGCAGGGTCTCGATTGGGAGAAAGGAGATCCACTCCGTTGTTGAGTGCCGAGAGGGTGGAAAATAGGTTGAAGAAGCCCACAACATTTTTGTGTAAGCTCAAATTTCGAAATGAACTTCCAGATCCAAGTGCTCAACCCAAGCTTATGGCTTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATCACATCCCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCAGATCTAGGGATACCTCTGGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCAGACAACCTCTTGCTCCAGAAGATGAAGAATTGTTGCGGGATGATGAAGCTGCTACACCTATTAAAAAAGATGGCATAAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTAGCGTGGCTTGTCAAAACACAATATATATCTCCTCTAAGCATGGAGTCCACAAAACAGTCTTTAACTGAAAAACAAGCTAAGGAGCTGAGAGAGATGAAGGGAGGCCGTGGCATTTTGGACAATCTAAACAGTAGGGAAAGACAAATTAGGGAAATTGAAGCATCGTTTGAAGCAGCTAAGTCTGATCCTGTTCATGCAACGAACAAAGATTTGTATCCTGTTGAGGTTATGCCATTACTACCCGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCCACGGTCGATTCAGAAATGTATGCTAAGTTGGACAAATCTGTTCGTGACGCCTTTGAATCAAAGGCAGTTATGAAGAGTTATGTTGCAACGAGTTCAGATCCTGCTAATCCTGAAAAGTTTTTGGCATATATGGCCCCAGCACCAGGAGAGTTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCGTACTCTTGGATTCGCGAGTATCATTGGGATGTTCGGGGTGATGATGCAGACGATCCTACAACATTCTTGGTTGCATTTGATGATTCAGAAGCACGTTACTTGCCTCTTCCGACTAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAGGAGAAGAGTTTGAGCAATGTCCAGTACCTTCAAGAGTGACTGTAAGACGGAGGTCTAGTGTCGCTGCGATTGAGCGGAAGGATACTGGGGTTTATACAAGTTCAAAGGGCAATTCCTCAAAGAGAGCTCGTCTAGACATGGACGATGGTCTAGAACACCAACATAGAGGTGCTTCACACCAGGACAACTATCAGTCTAGTGGAGCTGAAGATTACATGTCTGAGTGA 2478 0.4637 MDRNQSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLHYRDSKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRAGNAEGNDAIVFAWICRCMRSFQQLKKEYAALRKKLEAYFQLARQAGPQETAWFSCVEVQTLACDSWFKGMASYRPFPPQSSQIQNPIPSGNHQYTNNNQNWGAYGDPSNASFPQIPPNSNYHHQQQQHQNQHHAPYAPPNPHHPRYPYPPPPPPPPEASYQPPPPPPPPVYYPSNSQYSNQPPPPPPPSSPPPPPPPVSPPPPPPATQNNEERRFKDPSTSGRREYDPSNHGIAHKQHKHQPPVPAKKVNGPPGRTETEEEKRLRKKREFEKQRQEEKHRQQLKESQNTVLQKTHLLSSGKGHGMIAGSRLGERRSTPLLSAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRQPLAPEDEELLRDDEAATPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRGILDNLNSRERQIREIEASFEAAKSDPVHATNKDLYPVEVMPLLPDFDRYDDQFVVAAFDNAPTVDSEMYAKLDKSVRDAFESKAVMKSYVATSSDPANPEKFLAYMAPAPGELSKDIYDENEDVSYSWIREYHWDVRGDDADDPTTFLVAFDDSEARYLPLPTKLVLRKKRAKEGRSGEEFEQCPVPSRVTVRRRSSVAAIERKDTGVYTSSKGNSSKRARLDMDDGLEHQHRGASHQDNYQSSGAEDYMSE 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00198 825 FunFam Histidine-containing phosphotransfer protein 1 1 147 - -
Vian9g00198 825 Coils Coil 117 137 - -
Vian9g00198 825 SUPERFAMILY Formin homology 2 domain (FH2 domain) 279 416 - -
Vian9g00198 825 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 401 825 IPR007133 GO:0006368|GO:0016570|GO:0016593
Vian9g00198 825 Gene3D HPT domain 1 146 IPR036641 GO:0000160
Vian9g00198 825 PRINTS Proline rich extensin signature 280 305 - -
Vian9g00198 825 PRINTS Proline rich extensin signature 243 259 - -
Vian9g00198 825 PRINTS Proline rich extensin signature 261 278 - -
Vian9g00198 825 Pfam Paf1 431 773 IPR007133 GO:0006368|GO:0016570|GO:0016593
Vian9g00198 825 MobiDBLite consensus disorder prediction 233 304 - -
Vian9g00198 825 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 140 IPR036641 GO:0000160
Vian9g00198 825 MobiDBLite consensus disorder prediction 173 421 - -
Vian9g00198 825 Coils Coil 578 598 - -
Vian9g00198 825 MobiDBLite consensus disorder prediction 349 380 - -
Vian9g00198 825 MobiDBLite consensus disorder prediction 776 825 - -
Vian9g00198 825 MobiDBLite consensus disorder prediction 306 330 - -
Vian9g00198 825 MobiDBLite consensus disorder prediction 173 230 - -
Vian9g00198 825 MobiDBLite consensus disorder prediction 791 809 - -
Vian9g00198 825 MobiDBLite consensus disorder prediction 810 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00198 Vian-Chr9 1628568 1637334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00198 K15174 - gmx:100800148 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00198 9 1628568 1637334 Vian9g00198 9 1628568 1637334 ECH