Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00187 ATGGTGAGTGAGCAAAGAATAGCAGAGGAGACCCTGCAGGAGTCCAAGGTGGCTGCTTTGGAGACCAGTGGCACAATGAGTGGACCCCTCGCCGGAGCCGCCACCAGGACCCGCCGGCGCCGGAGGGTGGAGGCTATGCAACTGGTTCTGAGAGGGTTGTGCATGGCCTCCTCTGTTGTTTCAATCTCACTCATGGTCACTGCTAAGGAATCTAGTTCTGTCAGTATTTATGGCTTTCAATTACCTCTTCACTCCAAATGGTCTTTCTCTGAGTCATACGAGTATCTTGTTGGGGTTTCTGCTGCTGTTGCAGCTCATTCCATGCTTCAACTACTCATTGGCATATCCAGATTTCTTAGGACTTCTTCTGTCATACCTTCCAGAAATCATGCATGGCTTATTTTTGCTGGGGATCAGGTATTTGCATATGCATTGATGAGTGCTGGATCTGCTGCATCTGGGGTGACCAATCTGAATCGCACAGGAATTAGACACACGGCTCTGCCAAATTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGGGATTTCAATAGCCTTCACTTTCACCAGCTGTTTTTTGCTGGCTACATCTGCTGTCCAAGATGTAATATGGCTCTCCCAACACTGA 633 0.4834 MVSEQRIAEETLQESKVAALETSGTMSGPLAGAATRTRRRRRVEAMQLVLRGLCMASSVVSISLMVTAKESSSVSIYGFQLPLHSKWSFSESYEYLVGVSAAVAAHSMLQLLIGISRFLRTSSVIPSRNHAWLIFAGDQVFAYALMSAGSAASGVTNLNRTGIRHTALPNFCKPLHKFCDHVGISIAFTFTSCFLLATSAVQDVIWLSQH 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00187 210 Pfam Casparian strip membrane protein domain 41 194 IPR006702 -
Vian9g00187 210 NCBIfam plant integral membrane protein TIGR01569 48 198 IPR006459 -
Vian9g00187 210 PANTHER CASP-LIKE PROTEIN 4A4 27 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00187 8 210 Miscellaneous Gene Families AT3G16300 46.635 1.82e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00187 - - pvu:PHAVU_010G146500g 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00187 9 1508574 1510656 Vian9g00187 9 1508574 1510656 ECH