Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00182 ATGGCTTCTCACTTCAATCTGCACCATCAACTTTTCAACTACTCATCCGTGGGGCTAGATATCAGAAAAAGAACAACGGCTTATGCCCTTCAACATGCCAATTCAAATGTGTTAGATGAGAGAAATAATAGTTCTTTGAATAGTGGCATGCTAGTTGGATCTCTGTCTTCATGTTACACATCCTTCAAGAAGCTCTCATTGTTGGCAGCATCAGCTAAGACTTGTTTTTACGGTTCTGATGATCAAAGCAAAGAAGCAGTTGAGGTTACTGATGTTCCATCCAGTAGTGAGGGAATAGAACATAATAGGGTGCACTGTGTCGTGTGGTTATTGCATGAATCTTCTAGGAGCTTTTCCCAGTCAATCAATTCGCTTGGAGTAGCAAGGAGTGGTCCTGCTCTTGCAATGGCTTGGATTGGAAAGGATGTGGGTGAATGGCATAGACGTATGGCTTATGAGGTTGCAGTTTATGCTTTAATGAAAGCAGTAATTGATTTGGAGATATTGCTTTCACATGAACGACTAAATGAATTTTCCCCAGTTAAAGAGATTTTGAGCCCACAAATGAATGAAATGGGAGAGCACATTGAAATTCGACTGAAAATGAAGCATCCATATTTGGTGCAGTGGTTTAGAGACACTGAAATGCCGCGGATAGCAGGATATTTTATTCCACTTCTAAAGAAGTGGTCCGTGGAATATGCAGGAAGCGGTATTGCAGGAATTATTGTGGCTATAACATGTTGTAGTGCAGTGGTTAAATTTGGCTCCAGGCATATCTGCTGCTCCTTACTTGTATTGTCTCTTGAAGATGTTTTGGTCAAGCTTATGGACTTTTCACCCAATCTTGCATCTATGGACAAATTACATCAGTTAGCAACTGAGGCAGGATTTGAACAGTGTTTCTTGTACCATTTTGGTGGGAAGGTTTTTCCCAGTGAGAAAACTGAGGACCTAGAGTTTTGGATTGGTTTGGCCCACAAGAAACTATTGAAAGCCTTCAATGAAGAAAGCATCTCTTTAAAGAAGCAAAATTTTCAACAAAAGATACGAGCAGACAGTTTGGCCACATTGGGGCTTTTTACATACCTTGGAAGAAAGACTAGAATGTTTTTGTCAGTAATGGGCATTAAGGATCTTGACGGAGTAGTCAAGGACTTCCTCAGGTACCTGGAATTTGGCATTCTTTTCATTTATCCGGAATTTTCCTCCATCAGTGTGTACCAGTGTTTCATGGAGGTGGTAACAGATGAGATAGGATGGCTTGATTTTTATATGTCCTTTGTTCAAATAAACTGCAAGGAGAAAAGGTCTAAACATAATGCTCGCCAGGCAGAGAAAGAGATAATTTCTTCTGTAGTTTTTACTGTGTGCTATGATGTTTTCTCTGGGTTTGCACACTTCAATCGCTCAACTCAACAATCATTTGACACAGCTTCACGGTCATACTTGCTTATTTGTCAGGGTTTGCTTAGTATTTGTCTGCAATATCACTGGGCTGCTTATGACAAGTCGGGGGAATCACTAAATACCATGGATCATGCTGCAATTGACAACCAAACATCATATATGGGAAGTATAAATGGACCCAAGTTACCTCGGGTGTTTGAAGTGCATCAGATGTCACATGATTTAACTACAGAAGGATGTCCAGAGATTAATTTTCGAAACAGTAGTACATTCAAAAAGGCTTCAGTTTCTGCAATCACAAGTAAGAAAACATATGAGAAAGACTCTGATATTGACAAGTCAAATACTCAGCCTCAAAATTTTATCAAGAGATACATAATCAAATTGGCATCCACAAGTGCAGACATCTGGATGGGTACTGTATTGCTCTTCATAGACATTTCAGTTGCTTTAGAGCTACTTTCAAGGCAAATGCATGGCTGCAAGCCTTCTGGTAGTCAAAGAAAGAGGCTAAACAGAACCTTGTCTGACATAATTGTGCTAATTCCAGTGACAATCTTGATGCTACTTCCTGTAACAGCTGTAGGCCATGCAGCTATTCTGGCAGCTATCAAGAAGTATATGCCGTTCTTGATCCCTTCATCTTATTCTTCTGAGCGCTTGGATGTTGTAAAGCAAATAAAGCAAACTAGAGAGATGGGTGATCAGTTACATTTGGCTCAGTTTGACCTTGAAGATCAACCAGTAACCATTTCTTGA 2169 0.4002 MASHFNLHHQLFNYSSVGLDIRKRTTAYALQHANSNVLDERNNSSLNSGMLVGSLSSCYTSFKKLSLLAASAKTCFYGSDDQSKEAVEVTDVPSSSEGIEHNRVHCVVWLLHESSRSFSQSINSLGVARSGPALAMAWIGKDVGEWHRRMAYEVAVYALMKAVIDLEILLSHERLNEFSPVKEILSPQMNEMGEHIEIRLKMKHPYLVQWFRDTEMPRIAGYFIPLLKKWSVEYAGSGIAGIIVAITCCSAVVKFGSRHICCSLLVLSLEDVLVKLMDFSPNLASMDKLHQLATEAGFEQCFLYHFGGKVFPSEKTEDLEFWIGLAHKKLLKAFNEESISLKKQNFQQKIRADSLATLGLFTYLGRKTRMFLSVMGIKDLDGVVKDFLRYLEFGILFIYPEFSSISVYQCFMEVVTDEIGWLDFYMSFVQINCKEKRSKHNARQAEKEIISSVVFTVCYDVFSGFAHFNRSTQQSFDTASRSYLLICQGLLSICLQYHWAAYDKSGESLNTMDHAAIDNQTSYMGSINGPKLPRVFEVHQMSHDLTTEGCPEINFRNSSTFKKASVSAITSKKTYEKDSDIDKSNTQPQNFIKRYIIKLASTSADIWMGTVLLFIDISVALELLSRQMHGCKPSGSQRKRLNRTLSDIIVLIPVTILMLLPVTAVGHAAILAAIKKYMPFLIPSSYSSERLDVVKQIKQTREMGDQLHLAQFDLEDQPVTIS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00182 722 PANTHER LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN 30 702 IPR044202 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00182 Vian-Chr9 1462970 1468245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00182 601 686 EF-hand Containing Proteins AT3G59820 31.395 1.86e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00182 - - gmx:102668384 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00182 9 1462970 1468245 Vian9g00182 9 1462970 1468245 ECH