Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00181 ATGGAATCGAGTCGAAGAGCAGTGGAGTCGTACTGGCGGTCGCGGTTGATCGATTCAGCTACGTCCGATGAAGATAAAGTCACGCCCGTTTACAAATTGGAGGAAATCAGCGAGCTTTTGCGTTCTTCGCATGTTAGTATTGTGAAGGAGGTTTCGGAGTTTGTCTTAAAACGTTTGGAACATAAAAGCCCAATTGTGAAACAGAAGGCTTTAAGATTGATAAAGTATGTGGTTGGGAAGTCGGGCGTGGAGTTCAGAAGGGAAATGCAGAGACATTCAGTGGCGGTTCGTCAGTTGTTTCACTACAAGGGACAGTTGGATCCTTTGAAAGGCGATGCACTAAATAAGGCCGTGAGAGACACTGCTCACGAGGCTATCTCTGCCATCTTTTCAGAAGAGAATAGTAAGCCAGCACCCGCTGAAGATCTAAACCGGCGGATACAAGGGTTTGGGAATAAAAACTATGAACCGCCACAGGAAGATAAAAAATCTTTTATCAGTGAGGTTGTTGGTATTGGAAGCGCGTCAATTAAGCAAGGGCTTAATAGCTTAACACAGGGACATTCGCTGATGAAAAATGATCCCGGCAGCTATAAGAGTCCAAATCTTCGAAGATCGTTGACAAATGAAACAGAACATGGTGACAGATATGAACCAATTTCGTATCATAATGAAGCTCAGAGTAGTTTTGGAGGTTCAAAGAATCAATCTTCTGGTCCTTGGAATCAGGATTCAAGAGTAACTAAGACGGAAACATCAAATGGGGATTCTGGTGCAAGTTATGTAGAGAGTAAGACAAGAGAGCATAAGTTGCTGGAGACAATTGTAACTTCAGGAGGTGTTCGCCTGCAACCCACTCGTGATGCAATTCAAGCTTTCCTAACGGAGGCTGCAAAGTTAGATGCATTGGCTTTATGTCATGCCCTTGAACTGAAGCTTCAATCTCCAATTTGGCAGGTTCGCATGAAAGCTGTTTGTGTCCTTGAGTCCATTCTGAGGAAGAAGGATGATGATCATTTTTCACTGGTGGAATCTTACTTCACTGAAAATAGAGATGTGGTGCTGAGATGTTCTGAATCTCCGCAAGTCTCTTTACGGGAAAGGGCTGCAAAGGTTCTTAGTCTTTTAGGTGGAGGCCAGTCAAACAACTCTGCAATTAATTCAGAGAATGCTGTGAAAACAGAGAATGCTGCTGTTGTGGAGCTGCCTAATTTGATAGACACTGGTGATTCAGATGATTATCACGGAACTGAGGACACTCTAAACAGTGTAACAGATCAAAATATATCAACTTTGACATCCACTCCTCTGGTTGATGATTTATTTGGAGATTTCAGCAGCTCTATTGGGGCTAGTCAAGAAATAAAAAATGATGATGATCCATTTGCTGATGTTTCATTTCACACAAGTGAGAACAAAGAAAATGCTGATGATCTCTTTTCTGGGATGACTGTTGGTAGTGATAAGCAGAGCAATCACGCCAATCACAGGCAGGGGAATATGGGTGATCCTGAACTTTTTGACATTTTTACTTCCAATTCTGAGCACGGAAACCAGAAGGAGCTTGTCACTGATTTAATGGGCGGTCTATCAATGGATGAAAATACCTCAAGTACGACGCAGAAGGGAGCATCTCCTTCCATGCAATTTGAATCTTTATTTTCAGGCTTAACTGACCATATTCCTGGCAATACTTCAGATGGCATGTTGAGCTCTCAGCCAATGGGGTTGAATGTAAATCCCATTTTTCCTAATGGTACTCTGCCTTTTAATATGCAACCTGGCTTCATGTTGAACCAAGCTTATTCTTCCCAGCCTCTTAATTACGGTGCCATGGGAACTCTTTTGGCTCAACAGCAATTCTTAGCAACAATGGCTAATTTCCAACACCTTAATAATATCAACATGCGAGATGATGGTGTTGCTCAAATGGCTGGACCGAATGGAAAATCACCCTTGCCAGACATATTTCAACCAAATTTTCAAACTCAAACTCCTAGCTCAATGATCAACACCTCAAGGAAAGAAGAAACTAAAGCATTTGACTTTATCTCTGACCATATGACCTCTTCTCGTGATTCAAGGAGAATGATTTAA 2097 0.4211 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEISELLRSSHVSIVKEVSEFVLKRLEHKSPIVKQKALRLIKYVVGKSGVEFRREMQRHSVAVRQLFHYKGQLDPLKGDALNKAVRDTAHEAISAIFSEENSKPAPAEDLNRRIQGFGNKNYEPPQEDKKSFISEVVGIGSASIKQGLNSLTQGHSLMKNDPGSYKSPNLRRSLTNETEHGDRYEPISYHNEAQSSFGGSKNQSSGPWNQDSRVTKTETSNGDSGASYVESKTREHKLLETIVTSGGVRLQPTRDAIQAFLTEAAKLDALALCHALELKLQSPIWQVRMKAVCVLESILRKKDDDHFSLVESYFTENRDVVLRCSESPQVSLRERAAKVLSLLGGGQSNNSAINSENAVKTENAAVVELPNLIDTGDSDDYHGTEDTLNSVTDQNISTLTSTPLVDDLFGDFSSSIGASQEIKNDDDPFADVSFHTSENKENADDLFSGMTVGSDKQSNHANHRQGNMGDPELFDIFTSNSEHGNQKELVTDLMGGLSMDENTSSTTQKGASPSMQFESLFSGLTDHIPGNTSDGMLSSQPMGLNVNPIFPNGTLPFNMQPGFMLNQAYSSQPLNYGAMGTLLAQQQFLATMANFQHLNNINMRDDGVAQMAGPNGKSPLPDIFQPNFQTQTPSSMINTSRKEETKAFDFISDHMTSSRDSRRMI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00181 698 MobiDBLite consensus disorder prediction 225 264 - -
Vian9g00181 698 Pfam ENTH domain 16 129 IPR013809 -
Vian9g00181 698 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Vian9g00181 698 SMART VHS_2 13 148 IPR002014 GO:0035091|GO:0043130
Vian9g00181 698 CDD ENTH_like_Tepsin 13 132 IPR035802 -
Vian9g00181 698 PANTHER UNCHARACTERIZED 5 688 IPR039273 -
Vian9g00181 698 SUPERFAMILY ARM repeat 37 381 IPR016024 -
Vian9g00181 698 Gene3D - 2 139 IPR008942 -
Vian9g00181 698 MobiDBLite consensus disorder prediction 225 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00181 Vian-Chr9 1457854 1462012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00181 - - gmx:100790466 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00181 9 1457854 1462012 Vian9g00181 9 1457854 1462012 ECH