Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00175 ATGGCAGAGGATTGGAAGCAAACAGCTCTTCTTGTCATCGACATGCAGAAAGATTTCATAGAAGATTGGAGTCCTGTGGCACTAAAAGCAGGGAAAGACATTGTTCCAAATGTGGTTAAGGCCGTCGATATTGCAAGGCAGCGTGGCATTCTCATAGTTTGGGTAGTACGAGAAAACGATCCGTTAGGAAGAGATGTTGAGCTTTTTCGGAGGCATTATTATACAGAGAAGAAAGTAAAAATAGGGTGTAAAGGAAGTGAAGGTGCATCATTGGTTGATGGGTTGGTAATCAAAGAAGAGGATTATAAACTTGTGAAAACCAGGTTCAGTGCATTCTTTGCTACACACCTTCATTCGGTTCTTCATGCTGCAGGAATTCATAATTTGGTGATCACTGGAATTCAAACTCCAAATTGCATCAGACAAACTGTGTTTGATGCTGTAGCGTTGGACTATCCAAAAGTGACTGTTATTGTTGATGCTACTGCAGCAGCTACACCAGATGTTCATCAAGCGAATTTGTTTGACATGAAAAATGTTGGAGTTGCAACCCCAACTTTACAAGAATGGAGTGAAGGCAAAGCTTGA 588 0.4116 MAEDWKQTALLVIDMQKDFIEDWSPVALKAGKDIVPNVVKAVDIARQRGILIVWVVRENDPLGRDVELFRRHYYTEKKVKIGCKGSEGASLVDGLVIKEEDYKLVKTRFSAFFATHLHSVLHAAGIHNLVITGIQTPNCIRQTVFDAVALDYPKVTVIVDATAAATPDVHQANLFDMKNVGVATPTLQEWSEGKA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00175 195 CDD cysteine_hydrolases 9 178 - -
Vian9g00175 195 Pfam Isochorismatase family 8 183 IPR000868 -
Vian9g00175 195 Gene3D - 2 194 IPR036380 -
Vian9g00175 195 PANTHER OS02G0276400 PROTEIN 2 192 - -
Vian9g00175 195 SUPERFAMILY Isochorismatase-like hydrolases 4 190 IPR036380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00175 Vian-Chr9 1405997 1408201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00175 - - gmx:100499982 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00175 9 1405997 1408201 Vian9g00175 9 1405997 1408201 ECH