Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00173 ATGGAGAAGGAGGTTGAGCTTTGTTCAGCTCAAACCCAAATGGCTTCTCACCGAATTTCTCAATTCGAAGGGCGTGCTAAGGGTGGCCTCGTTACCATGCCTTTCATCATAGGAAATGAAGCACTTGCGAGAGTGGCAACCTTGGGGCTTCTGCCCAATATGATACTGTATTTGATGGGAAATTACAATCTTCATCTGGGCAAAGCTACCCAGATACTCCTGTTATCTGTTGCAACCACCAATTTCATGCCTCTTCCTGGAGCATTCATTGCCGATTCTTATCTGGGTCGCTTCCTCGCTGTTGGATTAGGTTCCTTCATCACTTTCCTGGGAATGGCACTATTGTGGCTAACAGCCATGATCCCAGAGGCTCGGCCTCCTCATTGTAATTCTGAAACTGAAAAATGTGTATCAGCAACATTTGGGCAAATGGCAGTGTTAATCTCTTCCCTTGCTCTCATGTCAATTGGAAACGGTGGCCTTTCGTGTTCCCTGGCTTTTGGTGCTGATCAGGTGAATAGAAAAGATAACCCCAATAATCAGAGGGCATTGGAGATATTCTTCAGCTGGTACTATGCTTCTTCAGCGGTATCAGTCATAATTGCCTTCACTGGAATTGTGTATATCCAAGATCATCTTGGATGGAAATTAGGTTTTGGAGTTCCAGCAGCACTTATGTTCTTGTCCACTCTTCTCTTTTTTCTGGCATCTCCACTCTATGTAAAGCATAAAAAACACAGCAGCTTGCTCACTGGCTTTGCCCGTGTCATTGTTGTAGCATGTAAGAACAGGAAACTTCGATTACCACATAAGATCTCTGATGGAATGTATCATCATAACAAGGACTCCGATCTAGTTGTTCCAACTGATAAACTGAGGTTTCTGAATAAAGCTTGCTTCGTTAAGGACCCTGATAAAGATATAGCCTTTGATGGCTCAACGTTGAATCCATGGAATCTGTGCACAGTTGATCAAGTAGAAGAACTAAAAGCTATTGTAAAAGTTATTCCTCTGTGGTCTACGGGGATCATGATGTATCTGAACATTGGAGGCTCATTTGGATTGCTGCAAGCTAAATCCCTTAACAGACATATCACTCCAAACTTTGAAGTTCCAGCTGGTTCTTTGGTAGTAATCATGATATTCACAATTTTCATTTGGATAGCTCTTTATGACCGTGTGATTATTCCTCTAGCATCAAAGCTCAGAGGCAAACCAATAAGGATCAGTTCCAAGACAAGAATGGGACTTGGGTTGTTTTTCTCTTTTCTCCACTTGGTAACTGCAGCAATTGTTGAGACAATAAGGAGAAGGAGAGCAATTAGTGAGGGACATGTTGATGACACACATGCAGTGTTGAACATGTCTGCAATGTGGCTTTTTCCTCAACTTTGCTTGGGTGGTATAGCTGAAGCATTCAATGCAGTAGGCCAGAATGAGTTCTATTACAGTGAGTTTCCAAAGACCATGTCAAGCATTGCTTCTTCCTTTTTTGGACTGGGAATGGCTGTGGGATATGTGTTATCTTCTTTACTATTCCGTGTTGTGGAAAAAGTTACTTCAAGAGGGGGAAATGATGGATGGATCTCAGATAATATTAACAAGGGTCATTTTGACAAGTACTACTGGGTTCTTGTCACTCTCAGTGCTGTTAATTTACTGTATTATCTACTTTGCAGTTGGAATTATGAACCTACTGCAGATCTACAATCAAAGGTAAATCAAGAAAATGGTTCCCAAGAGGAAGAATTACCATTAATTGGAGCCAGAACTGAGGGTCCATTTGATAAGGTATCACAGTTTAGTGAAGAAATTTTAAGAACTTCATCACATAAAACTGTAACTTGA 1848 0.4134 MEKEVELCSAQTQMASHRISQFEGRAKGGLVTMPFIIGNEALARVATLGLLPNMILYLMGNYNLHLGKATQILLLSVATTNFMPLPGAFIADSYLGRFLAVGLGSFITFLGMALLWLTAMIPEARPPHCNSETEKCVSATFGQMAVLISSLALMSIGNGGLSCSLAFGADQVNRKDNPNNQRALEIFFSWYYASSAVSVIIAFTGIVYIQDHLGWKLGFGVPAALMFLSTLLFFLASPLYVKHKKHSSLLTGFARVIVVACKNRKLRLPHKISDGMYHHNKDSDLVVPTDKLRFLNKACFVKDPDKDIAFDGSTLNPWNLCTVDQVEELKAIVKVIPLWSTGIMMYLNIGGSFGLLQAKSLNRHITPNFEVPAGSLVVIMIFTIFIWIALYDRVIIPLASKLRGKPIRISSKTRMGLGLFFSFLHLVTAAIVETIRRRRAISEGHVDDTHAVLNMSAMWLFPQLCLGGIAEAFNAVGQNEFYYSEFPKTMSSIASSFFGLGMAVGYVLSSLLFRVVEKVTSRGGNDGWISDNINKGHFDKYYWVLVTLSAVNLLYYLLCSWNYEPTADLQSKVNQENGSQEEELPLIGARTEGPFDKVSQFSEEILRTSSHKTVT 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00173 615 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 87 111 IPR018456 GO:0006857|GO:0016020|GO:0022857
Vian9g00173 615 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 28 563 - -
Vian9g00173 615 Gene3D MFS general substrate transporter like domains 4 570 IPR036259 -
Vian9g00173 615 CDD MFS_NPF1_2 33 563 - -
Vian9g00173 615 Pfam POT family 100 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vian9g00173 615 SUPERFAMILY MFS general substrate transporter 48 561 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00173 Vian-Chr9 1400538 1403033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00173 13 583 Organic Solute Cotransporters AT1G52190 55.172 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00173 K26551 - gmx:100804235 1068.91