Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00164 ATGGCTTCTCTTGCAACCTTAGCTGCTGTTCAACCAGCTGCGATCAATGGCCTTGCTGGAAGCTCCCTCACTGGAACTAAGCTCTCTTTCAAGCCCTCTCGTCAGAGTCTCAAATCCAAGAACTTCAGGAGTGGTGCTGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATTTGGGTAACACCACAGGGCAGTGGGACTTGTATGGCTCAGATGCACCTTCACCCTACAACTCTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGAGGATTGCTACTCAAGTTTCTGATATTGGGAGGTGGATCCACCTTGGCATACTTCAGTGCAACAGCCTCAGGTGATATTCTACCAATCAAGAAGGGTCCACAACTTCCACCAAAGCTTGGCCCTCGTGGCAAGCTCTAA 435 0.4828 MASLATLAAVQPAAINGLAGSSLTGTKLSFKPSRQSLKSKNFRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00164 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Vian9g00164 144 Gene3D - 98 120 - -
Vian9g00164 144 Pfam Photosystem I reaction centre subunit VI 7 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Vian9g00164 144 FunFam Photosystem I reaction center subunit VI 98 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00164 Vian-Chr9 1313578 1314661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00164 K02695 - gmx:100499832 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00164 9 1313578 1314661 Vian9g00164 9 1313578 1314661 ECH