Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00163 ATGACGAGAATGCAGAAACAAGCAAACCTTAGTGGTCAACTTGTAGTCACCGCGCTTCCACTGGCCGCTCCTGACAAAGCGATCACTCTCGCAGATTCTCCTGAGGACTGCCAGCATCAAGCCAATAGCGAGGTCCGCGACCTCGTCGGTCAACACTTCAGGCGTGTATGTCACGCGAATTCCCTTCTCTCTGCACTTCTCCACGTCAACCTTATCCACTCCCACGCTGAAGCTCGACACGATCTCCAGCTTCGGCAGCGCCTCGATCAGCGCCGCATCCGCGCCAGCGCTCGCGTTTCCGACCACCGCGCGGATCGCGGTGACGTGCTGACTCGGCAGCTGCGCCACGTTCGGGTAATCCCATGCGCGGAACAGCTTGTAGCGCTTGTCGAGCTCCTGCTCCAGGTATGGCATCACGTTAGCCACGAGGAGTACTCCGATAGATCCCATTTCGCCGGCGAAATTGGGGTTTCGTTAGGTTATGGATTCCACAGTCGCAACGCAACGCAACAAAAACTGATTCGGGATCCTCGCCCTCGACGTTCCCTTCCATATATAACGCATGCAAAGAGTTTGAGCGTTGAGAGTGCCACCGCATTAGATCCTGCTGCTGCTTCGGAGGAAGATCCAGTGTCATCAAAAAGTCAGGGATCAAAAGCTCAAAATGATCAAGACAAGGCTCCTAAGCCAAGGGTGAACAAGGAGGAAATTATAGCCAAAGAAAAACTACTGCAAGAAATGGAACAGATGAAGGAGAGATTTGCTAAACTCCTGTTGGGGGAGGATATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTCACAAATCTTGCAGCTGCTGTTTTTGGAGAGCAAAAGCGCCTAGAGCCAATGCCGCCAGAAAGGAAGGCAAGATGGAGAAAAGAAATCGATTGGCTTCTGTCAGTCACCGATTACATTGTTGAAATGGTTCCTGTGCAACAAAAAAACAAGGATGGCACAGTCATGGAGGTCATGACCACACGACAGAGAACTGATCTCCACATGAATATCCCTGCCTTGCGAAAGCTTGATACAATGCTTATTGACAGTCTGGATAACTTCAAAGACCAAAATGAGTTCTATTATGTATCAAGAGATGCAGATGATCCAGATAACAGAAAAAACGACAACAAGTGGTGGTTGCCTACACCTAAGGTTCCTCCGGAGGGTCTATCAGAGTCAGCAAGAAGGTTTGTTCAGTATCAGAAAGATTGTGTGAACCAAGTGCTTAAAGCAGCTATGGCCATAAATGCTCAAACTCTATCAGAAATGGAGATCCCTGAAAGTTATATTGAATCCTTGCCCAAGGCAAGTCAAAAGAAACAAAATGGAAGATCAAGTCTTGGGGACATGATATACAGGAGCATCACAGAAGAATTTTTCGATCCTGATCAGCTCCTAGCATCTATGGACATGTCATCAGAACACAAAATCCTAGATCTCAAGGACAGAATTGAGGCGTCCATTGTGATTTGGAGGCGGAAGATGAACCAAAAAGATTGTAAATCATCTTGGGGTTCTGCAGTGAGTATTGAAAAGAGAGAACTCTTTGAAGAGAGAGCAGAAACTATCTTACTTCTCCTAAAGCATCGTTTTCCAGGAATTCCTCAATCTGCATTGGATATAAGCAAAATCCAATACAACGGGGATGTGGGGCAAGCTGTTCTTGAAAGTTATTCAAGGATATTGGAGAGTTTAGCCTTCACAGTGCTGTCAAGAATAGAAGATGTACTCCATGCAGATTACCTCACTCAAAATCCACCACCATCAAGTAGAAGAAGTATTTCGAGAAACACAAATTCCAAGTCAGAAAAGTCTCCAACTCCTAAAGAAGAGGTGGAAAAGGGTAGCTCAGAAACAATGACACTATCAGATTTCATGGGTTGGAACAGTGATCAAGGTGAATCAGACCTTAAGAAAGACCCCTCAGATGATTTCTACAATGACATGGATAATGGAAAGCCCCAGAAACTTCCAGACATAGTGACCGACAAGAAAGTGTCCTACCTTGAGACATTGGGAGGCATGAGAAGTCCAACAGCACGCCATTAA 2091 0.4634 MTRMQKQANLSGQLVVTALPLAAPDKAITLADSPEDCQHQANSEVRDLVGQHFRRVCHANSLLSALLHVNLIHSHAEARHDLQLRQRLDQRRIRASARVSDHRADRGDVLTRQLRHVRVIPCAEQLVALVELLLQVWHHVSHEEYSDRSHFAGEIGVSLGYGFHSRNATQQKLIRDPRPRRSLPYITHAKSLSVESATALDPAAASEEDPVSSKSQGSKAQNDQDKAPKPRVNKEEIIAKEKLLQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGTVMEVMTTRQRTDLHMNIPALRKLDTMLIDSLDNFKDQNEFYYVSRDADDPDNRKNDNKWWLPTPKVPPEGLSESARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKASQKKQNGRSSLGDMIYRSITEEFFDPDQLLASMDMSSEHKILDLKDRIEASIVIWRRKMNQKDCKSSWGSAVSIEKRELFEERAETILLLLKHRFPGIPQSALDISKIQYNGDVGQAVLESYSRILESLAFTVLSRIEDVLHADYLTQNPPPSSRRSISRNTNSKSEKSPTPKEEVEKGSSETMTLSDFMGWNSDQGESDLKKDPSDDFYNDMDNGKPQKLPDIVTDKKVSYLETLGGMRSPTARH 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00163 696 FunFam Rop guanine nucleotide exchange factor 9 438 560 - -
Vian9g00163 696 Coils Coil 233 260 - -
Vian9g00163 696 MobiDBLite consensus disorder prediction 197 235 - -
Vian9g00163 696 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 245 598 IPR005512 GO:0005085
Vian9g00163 696 ProSiteProfiles PRONE domain profile. 237 604 IPR005512 GO:0005085
Vian9g00163 696 MobiDBLite consensus disorder prediction 209 223 - -
Vian9g00163 696 Gene3D PRONE domain, subdomain 1 251 595 - -
Vian9g00163 696 Gene3D PRONE domain, subdomain 2 438 560 - -
Vian9g00163 696 MobiDBLite consensus disorder prediction 647 664 - -
Vian9g00163 696 FunFam Rop guanine nucleotide exchange factor 14 476 602 - -
Vian9g00163 696 MobiDBLite consensus disorder prediction 595 674 - -
Vian9g00163 696 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 193 639 IPR038937 GO:0005085
Vian9g00163 696 MobiDBLite consensus disorder prediction 617 631 - -
Vian9g00163 696 FunFam Rop guanine nucleotide exchange factor 14 239 474 - -
Vian9g00163 696 MobiDBLite consensus disorder prediction 597 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00163 Vian-Chr9 1307263 1312522 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00163 - - gmx:100812078 822.002