Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00162 ATGGAGTCGATCGGAGTACTCCTCGTGGCTCGCGTGATGCCGTACCTGGAGCAGGAGCTCGACAAGCGCTTCAAGCTGTTCCGCGCGTGGGAGTACCCGAACCGGGCGCAGCTGCTGAGTCAGCATGCCGCCGCCATCCGTGCGGTGGTCGCAAGCTCGAGCGCCGGCGCGGATGCGGCGCTGATCGAGGCGCTGCCGAAGCTGGAGATCGTGTCGAGCTTCAGCGTGGGAGTGGATAAGATTGACAAGGAGAAGTGCAGAGAGAAGGGGATTCCTGTGACCTACACGCCGGACGTGTTGACCGACGAGGTCGCGGATCTCACTATTGGCTTGATACTGGCGCTCCTCAGGAGGATTTGCGAGTGCGATCGCTTTGTCAGGAGCGGCCAGTGGAAGCGCGGTAACTACAAGTTGACCACTAAGGTTTGTTTGTTTCTGCATTCTCGTCATTCTTCTTCTCTCGCAATGGAAGTAGATGATTTGCGGCATGGTATGGAAGATGGATCCGCAAGGGCGAGGAAATTTGAGGAGAAATACATGGAATCTGGGGATGCGAGAATTGGGGCTGGAAACCGATTCTGTAATTTAGGAATCGATTCTGGGACTGGGGAAACCGATTCTAGAGCTGTCGGGTCAGTGTTCTCTGGGAAAACTGTTGGCATTATTGGGTTAGGGAGAATAGGGGAAGCCATTGCGAAGAGGGCTGAAGGATTTAAGTGTCCAATAAGCTACTACTCAAGAACTGAAAAACGAGAGTCGAACTACAAGTACTATCCAAGTGTTGTAGAATTAGCATCTAATTGCGACATACTGGTTGTAGCTTGCGCACTGACTGAGGAAACCCACCACATAATCAACAGGGAGGTGATCAATGCCCTGGGTCCCAAGGGTTATCTTATCAACATTGGAAGAGGTAAGCATGTTGATGAAACAGAGTTAGTGTCGGCACTTGTAGAAGGTCGTCTTGGTGGGGCTGGGCTAGATGTGTTTGAAAATGAGCCTAGTGTTCCAGAAGAGCTATTTGGGCTTGAAAATGTTGTCTTGCTTCCCCATGTTGGAAGTGCCACAGTAGAAACTCGAACGGCCATGGCGGACCTTGTCCTTGGAAACCTGGAAGCTCATTTCCTTGGAAAGCCGCTGTTAACTCCCTTAATTTAA 1158 0.5147 MESIGVLLVARVMPYLEQELDKRFKLFRAWEYPNRAQLLSQHAAAIRAVVASSSAGADAALIEALPKLEIVSSFSVGVDKIDKEKCREKGIPVTYTPDVLTDEVADLTIGLILALLRRICECDRFVRSGQWKRGNYKLTTKVCLFLHSRHSSSLAMEVDDLRHGMEDGSARARKFEEKYMESGDARIGAGNRFCNLGIDSGTGETDSRAVGSVFSGKTVGIIGLGRIGEAIAKRAEGFKCPISYYSRTEKRESNYKYYPSVVELASNCDILVVACALTEETHHIINREVINALGPKGYLINIGRGKHVDETELVSALVEGRLGGAGLDVFENEPSVPEELFGLENVVLLPHVGSATVETRTAMADLVLGNLEAHFLGKPLLTPLI 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00162 385 Gene3D - 347 385 - -
Vian9g00162 385 Gene3D - 2 124 - -
Vian9g00162 385 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 135 - -
Vian9g00162 385 CDD HPPR 4 375 - -
Vian9g00162 385 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 11 381 IPR006139 GO:0016616|GO:0051287
Vian9g00162 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 354 IPR036291 -
Vian9g00162 385 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 219 246 IPR029752 -
Vian9g00162 385 FunFam Putative 2-hydroxyacid dehydrogenase 184 356 - -
Vian9g00162 385 Gene3D - 185 346 - -
Vian9g00162 385 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 205 353 IPR006140 GO:0051287
Vian9g00162 385 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00162 Vian-Chr9 1302197 1305219 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00162 - K18606 pvy:116136189 346.28