Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00158 ATGGAAAATCCTAAAGTTATTGCAAAGTTTGAATGGAGAACAAAAGTGAATTCTCCTGTCGTTGAGGATGCAATTGATCACTTCACCAGACATTTAATTTCTGAGTGGGTGACAGATCTTTGGTATTCTCGGTTAACACCAGACAAAGAGGGTCCTGAGGAGTTAGTGCAAATAATTAATGGTGTTCTTGGGGAAATTTCAGGACGCATGAGAAACATAAATTTGATAGATTTTTTAATAAGGGATCTTGTTAATGTTATTTGCACACACTTGGAGCTGTTTCGTGCTGCCCATTCAACGATTGGAAAACATCATACTGGTCCATTAACAATCGAAAGTCGAGACATGGAACTAAAAATTGTTTTGGCTGCTGAGAACAAATTGCATCCTGCATTATTTTCTGCAGAAGCTGAGCATAAGGTTTTGCAGCATCTGATGACCGGTCTTATGCATGCTACTTTCAAGTCTGAGGATTTGCGGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCATGTGCTGTAATACGACCTGTCCTAAACTTAGCAAATCCAAGATTTCTTAATGAGAGAATTGAATCCGTAGTGGTTAACAAGACCAAGGTTAACAAGGGGGTTAATGCAGCTCAAGAGGCATCTCACACTAAAGAAGATGAGTTACAGGCTTCCTCTCATGATTTCGCCAAGACTTCGGATCCTTCTGTTACTGGTGTTGAGCTTGTGCAGCTAAAAAATGGTCAATCAAGAAATGTAGAGACATCTGCAGAACAAAATGCTCGTGATAATACTATTAAAGATCCATTGCTTTCAGTTTCAGTTGATACTCGATCTTCCCGAACATGGAGCTCATTATCTGCAAATCCCCAAACTAATGGTGACCAAAGTATTCAACGACATCGCTCAGGTGGAGAGTGGGGAGATATTTTAGATGTCATCTCTCGCAGAAAGACCCAAGCTCTTGCTCCTGAACATTTTGAGAATGTGTGGACTAAAGGGAAAAATTACAAGAAAAAAGATGGTGATAACCAGTCAAATGAGCATGTTACACAGCATCCTGTGGTAGGGAAACTGCCAAAGGTAGACCACATGAAAGCAATATCTGGACCCAAACAAAGAGATAATAATTCCAAGCTTATTCCCCAAAAGGGACGCCACATTAATTCTGGACACGGTAGTCAATTATCTGTTGAAAATACATCCATTCATGTGGACAAGAATGGATCAAGTTCAGTTACCTCATGTAAAGACGATGAGTCAGTTACATCATACAAAGAGGATGAGAACATCCACATTTATGGGCAGATAAGTGATTCAGAGAGCAGTACATCTTATACTTCTGAAGATGATGAAAGTAGTACTGTCACTGGTCTTGATTCCCCTGTCACTAAGGTTTGGGATGGAAGAAGTAATAGAAAGCAGGCAGTTTCTCATGTTCATCACCCACTTGAAAATTTTGACAATCACAGTGCAAAGAAAAGGAACAAGAGCCATTCTCGCTATTCAAGACTATCCAGAGCCCAATCTGGCAATAAAAGGTCTTGGTCAGGTGTTCATAAAATGCAAACGTGGCAGGAAGTTGAGAGGACAAGCTTTTTATCTGGTGATGGTCAAGACATACTTAATGCTTCAAAATCACATGTGGATTCTGAGGAGTCCAGTGATGATGCTGATATTGAAAGTTTGAGCAGACTTTATAGTGGAGCAGCAGCCTCTTCTTCTGCCCACTCTATTTCTAAAACAGAATCTAGTAGTTTGCCTATTACTCCCCTGAAAAGTTCCTCTGGGGTGGATTCCTTTTACAAGTTGAGATGTGAGGTCTTAGGTGCAAATATTGTGAAGAGTGGCTCTAAAACATTTGCTGTGTACTCCATATCCGTTACAGATATAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATAGACGCCTGAAAGAGTTCTCTGAGTATAATCTTCATTTGCCACCAAAACATTTTCTGTCAACTGGTTTAGATGTACCAGTCATTCAAGAGCGGTGTGAATTACTGGATAAATATTTGAAGAAACTTATGCAACTACCAACAGTTTCGGAATCAATTGAAGTTTGGGACTTTCTCAGTGTTGATTCTCAGACTTACATATTCTCAAATTCTTTTTCTATCATGGAAACATTATCAGCCGGCTTGGATGCCAAGCCATTTGAGAAGACTAAAAACACTTCTCACTTTTCTGCACCTGCAAGTGATCCTGTGTCCTTCCGGAGAGAAAACTGTAGTGCTGAAAGTAAAGAGTCGGTTATGAAAGGAAAAAATAATGTTGGGGCCGATGGATTGAGGTCAAAAGTAAACAACTTGCCTCTTTCTCTACCAAAAAAGAATACACATCAACCTACAAAGTCATTTGACAATTCTAGAGGCAATACAGACTTTCTAGCACAAAAGAGTGCACCTTCTCCCAATGACTCGCAAAAGACAGTGAAAGGAAGAGATAGTTCGAATGAGGTCTCTGAAGTGCACCGTGATACTTCTGATGCTTTTCCAACAGAGTGGGTGCCGCCGAATTTGAGTGTACCTATATTGGATTTGGTTGACGTTATCTTACAGGTTCAAGATGGTGGATGGATTAGGCGGAAGGCCTTTTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGTGACGCCTTTGATGACTGGTTGATTGAGAAAATCCAGCTTCTTCGAAAGGGATCAGTGATTGCTTCAGGGGTCAAGCGAGTAGAGCAAATACTCTGGCCTGATGGAATATTCATAACCAAGCATCCAAATAGACGACCACCACCACCACCTAGAAGCCCATCTCAAAGTTCTCCTCGTGGTAATCAAACTACACAAGTATCTTCTCCTATGTTGGAAGATGAACAGACACGGGAGGCAGATCGGCGTGCAAAATTTGTATATGAGCTAATGATTGATCAAGCACCACCAGCAATTGTAGGTCTTGTTGGTCGGAAGGAGTATGAGCAAAGTGCTAGAGATCTATATTTTTTCCTTCAGTCATCCGTTTGCTTGAAGCAGCTGGCTTTTGACATCCTGGAGCTACTTCTGACGTCGGCATTTCCAGAGCTTGATGATATTTTCAAGCAGCTGCACGACGAAAAGCATAAATTTGGTGAGTTCAGAACACAGTAA 3168 0.4072 MENPKVIAKFEWRTKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLVNVICTHLELFRAAHSTIGKHHTGPLTIESRDMELKIVLAAENKLHPALFSAEAEHKVLQHLMTGLMHATFKSEDLRCSFFRYTVRELLACAVIRPVLNLANPRFLNERIESVVVNKTKVNKGVNAAQEASHTKEDELQASSHDFAKTSDPSVTGVELVQLKNGQSRNVETSAEQNARDNTIKDPLLSVSVDTRSSRTWSSLSANPQTNGDQSIQRHRSGGEWGDILDVISRRKTQALAPEHFENVWTKGKNYKKKDGDNQSNEHVTQHPVVGKLPKVDHMKAISGPKQRDNNSKLIPQKGRHINSGHGSQLSVENTSIHVDKNGSSSVTSCKDDESVTSYKEDENIHIYGQISDSESSTSYTSEDDESSTVTGLDSPVTKVWDGRSNRKQAVSHVHHPLENFDNHSAKKRNKSHSRYSRLSRAQSGNKRSWSGVHKMQTWQEVERTSFLSGDGQDILNASKSHVDSEESSDDADIESLSRLYSGAAASSSAHSISKTESSSLPITPLKSSSGVDSFYKLRCEVLGANIVKSGSKTFAVYSISVTDINNNSWSIKRRFRHFEELHRRLKEFSEYNLHLPPKHFLSTGLDVPVIQERCELLDKYLKKLMQLPTVSESIEVWDFLSVDSQTYIFSNSFSIMETLSAGLDAKPFEKTKNTSHFSAPASDPVSFRRENCSAESKESVMKGKNNVGADGLRSKVNNLPLSLPKKNTHQPTKSFDNSRGNTDFLAQKSAPSPNDSQKTVKGRDSSNEVSEVHRDTSDAFPTEWVPPNLSVPILDLVDVILQVQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIEKIQLLRKGSVIASGVKRVEQILWPDGIFITKHPNRRPPPPPRSPSQSSPRGNQTTQVSSPMLEDEQTREADRRAKFVYELMIDQAPPAIVGLVGRKEYEQSARDLYFFLQSSVCLKQLAFDILELLLTSAFPELDDIFKQLHDEKHKFGEFRTQ 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00158 1055 MobiDBLite consensus disorder prediction 471 492 - -
Vian9g00158 1055 ProSiteProfiles PXA domain profile. 18 197 IPR003114 -
Vian9g00158 1055 Pfam PX domain 631 709 IPR001683 GO:0035091
Vian9g00158 1055 Gene3D - 601 717 IPR036871 GO:0035091
Vian9g00158 1055 MobiDBLite consensus disorder prediction 207 234 - -
Vian9g00158 1055 SMART PX_2 605 709 IPR001683 GO:0035091
Vian9g00158 1055 Pfam PXA domain 18 195 IPR003114 -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 248 303 - -
Vian9g00158 1055 Pfam Sorting nexin C terminal 874 1013 IPR013937 -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 827 844 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 502 520 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 930 969 - -
Vian9g00158 1055 PANTHER PX SERINE/THREONINE KINASE PXK 16 1050 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 367 520 - -
Vian9g00158 1055 ProSiteProfiles PX domain profile. 601 713 IPR001683 GO:0035091
Vian9g00158 1055 MobiDBLite consensus disorder prediction 786 826 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 948 964 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 738 845 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 212 226 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 248 299 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 434 460 - -
Vian9g00158 1055 MobiDBLite consensus disorder prediction 370 418 - -
Vian9g00158 1055 SMART PXA_3 22 201 IPR003114 -
Vian9g00158 1055 SUPERFAMILY PX domain 602 710 IPR036871 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00158 Vian-Chr9 1277362 1282714 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00158 K17925 - gmx:100790491 1733.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00158 9 1277362 1282714 Vian9g00158 9 1277362 1282714 ECH