Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00152 ATGATCATGTTAAAGGAGTTATTTAACAAGAACACAGCATCTAAGATACCCAACAAAAGTCATTTTCCATTTTCAGCAAACTTGGTCTTTTCAGATTCTAGGACACAAAATGTTTCGGTGGCTATTGAAGCCCAGGTTCTATTCAAAATGGAACATTTTTCTTTTCTTACTGATTTTTGGTTGTGTTTTACTTCAAAAAAAACCAGCTTGTCTTACGTGAAGGCTTTGAAAATTCGGCTGGAGAGAATACAGAATAGGAAGAAAGCAGTGCTGAAGTTTTTGAAGAGTGACATCGCAGAGCTTCTAAGGCTTGGCCTCGAATACGATGCATATACAAGGGCTAATGGACTTCTGTTAGAGCAGAAAATGTTATCCTGCTATGAACTCGTTGAAAACTTTGTTGGGTGCATATTACCTCATGTTGAATACCTAGCTAAGTACAATGATTGCCCTGATGAATGCAAGGAAGCTGTTCCATCATTGATATATGCTGCTGCAAGATTTGGTGATCTGCCAGAATTGCTTGAGCTCAGAACATTATTTACCGAAAAATATGGGAATTCTCTTGAACCTTACATAAACAAAGAGTTTGTTGAGAGGCTGAGGCAAGTTCCACCTACAAGAGAACTGAAGATTGGACTATTATATGATATAGCACATGAGTTCTCCATAGAATGGGATGACAAGTCTCTTAGAGAAAGACTTTATACACAGTCGTCAGTACGTGAAGGGAAGCCTGGGGAAGATTTCAATGGATCAAAAGAAAAGGAAAGAGTAGGAAGGAAGGATTTGAATGATGACTCATGGATTCATCAAAGCAGTAGCAGTGATGATGAAACAAGTCTGTCATCTAATGATGGTAGAAAGGGTACCGGTTCAAGTTCATTGGGAAGCATATCTGAGGATGAAGTTGAAAAAGCTGAAACCAACAGGCCAATTTCTTCCTTTTGGCGCATTCCACCTCCCTACATCAAACAAAAGACCAACAAAAGTGATTCAAAGAAAACAACACATTCTGACACTGCAACAACACCAGATTCAGGTGGAATGAACTCAGACAGAAAAAAACGTTATTCTTCTCAACAACCAGAACATGATACTGAGCAAACCAGAAGGCGTAGAAGCCCACATGTCAGAGGAAAATCTCTTCCTTCTGAACCCAACACTGCTGTGGAAACATCAAAAGGGCATATACGAACAATTTCCTTAGAATCTGGAATGCGGGGTGGTGCAAGGCATGTGCATCCGAATCTACCGGATTATGATGATTTGAGAGTTCGTCTTTTAGCTCTTCGACAGAGATAA 1305 0.3969 MIMLKELFNKNTASKIPNKSHFPFSANLVFSDSRTQNVSVAIEAQVLFKMEHFSFLTDFWLCFTSKKTSLSYVKALKIRLERIQNRKKAVLKFLKSDIAELLRLGLEYDAYTRANGLLLEQKMLSCYELVENFVGCILPHVEYLAKYNDCPDECKEAVPSLIYAAARFGDLPELLELRTLFTEKYGNSLEPYINKEFVERLRQVPPTRELKIGLLYDIAHEFSIEWDDKSLRERLYTQSSVREGKPGEDFNGSKEKERVGRKDLNDDSWIHQSSSSDDETSLSSNDGRKGTGSSSLGSISEDEVEKAETNRPISSFWRIPPPYIKQKTNKSDSKKTTHSDTATTPDSGGMNSDRKKRYSSQQPEHDTEQTRRRRSPHVRGKSLPSEPNTAVETSKGHIRTISLESGMRGGARHVHPNLPDYDDLRVRLLALRQR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00152 434 PANTHER IST1 FAMILY MEMBER 73 432 IPR005061 GO:0015031
Vian9g00152 434 Pfam Regulator of Vps4 activity in the MVB pathway 73 224 IPR005061 GO:0015031
Vian9g00152 434 MobiDBLite consensus disorder prediction 350 373 - -
Vian9g00152 434 MobiDBLite consensus disorder prediction 237 398 - -
Vian9g00152 434 FunFam Vacuolar protein sorting-associated protein IST1 62 234 - -
Vian9g00152 434 Gene3D - 63 234 IPR042277 -
Vian9g00152 434 MobiDBLite consensus disorder prediction 269 300 - -
Vian9g00152 434 MobiDBLite consensus disorder prediction 247 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00152 Vian-Chr9 1226857 1230146 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00152 - - gmx:102665874 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00152 9 1226857 1230146 Vian9g00152 9 1226857 1230146 ECH