Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00140 ATGGCTACCGTGGTTGAAGAAAACAACGTTGAGTATGATAGTGATCCCGAAGATGCAAAGAGACTGTTAACAATGCGGAGGCGCGAAGCCAGTGATGACGAAGAAGCCGAAGGGGAAGAAGTCACTGATAAGAGGGAAGTTGGTAGAATAGAGGTTCGTTCTGATAACTTAGATGATGAAGGAGGTGTTGAAGATTATGCTAATGATGGTGATGATGTTGAAGAAGGACAAAAAGAATTGCAAGAAGAAGAAGAGGAGGAGGAGGAAGTTGAAGAAGTGTACGAGGAGAAGGGTGCAAGTGGGGGGGTTGAGGTTGAGGGTCCAGTGGTTGTGTCTAAGGAATCTGATGATGATGTCAGACCCCCTTTGGAAGATTTTACCGAGGACCATTCTGAGGAGAAAAAGGAGTCTGATCCATTTGCGGTTCCCACAGCCGGAGCTTTTTACATGCACGATGACCGATTTGGGGACAATGCTGGTACCCGCAACAGACGGATACATGGTGGAGGAAGGAGACTGTGGGAATCCAAAGATGGCAAGAAATGGGGTCATGATAAATTTGAGCAAATTTTGCATGAAAAGCATTATGAGGAGAGGAGACCTTCTAAGGGTAATTATCATGGCCGTGGTAATGGTCGAGGCACTGATTATAGAGGGTACGTACGAGGAAGTAAGAAAGGCTATAATAGCAGTAGCAATCAAAATCAGATGCCTAAGAGTGTTGTGAGAGGGAGAGGCCCCCAAAAGTATGAACGTAGCAACAAAATCAATGGTCCATCTTCCCAAGTGCAAAATAAACAATCTGGGAAATCTCGTGAGAGAAATTCAAATGTTAGTTTGGAGAGGACTTCGACACCTTCTTCCCATGCAGAATCTGACCTTGTGCCTTCCAAAAATCAAGTGCTGGCATCAAATTTGAATTCAGCTTCCCCACCATATTACCCCTCAGGCTCTTCCAGCAATGATATTAATTTGGCACAAAAAAGGGAGGTGAAAACAGGTGGCAGTAGCAGGAATGTTGGTCCTGTTGCTGTGGATGAGGGTTTTCCAGTTCAACAAAAGAATGCTCTGATTCAGGGAAAGAATGTTGTTGATTCCATCAGCATGTCAAAGTTGTATATAAATGAATCCACCCCTCGATCTGTTGGAAAGCCTTTGAACAATGTGCGTATGGCACGACCTGGTTCTTCTGTAGTCAATGCTTCTCAATCTCCTCACCCAAGGGCTTCTGGGACTGGGAGGGGAGTATCAATCCCAGTACATACAAATTTTCAGCGTTCTTCCTCACATAATAAAATTTCTCCATCAGAATTCCAGGCTATTCAGACAAGTTCTGTTCCAGGTAGGAATTCAACTTCTGTGCAAGCTACTGCCCCACAGTTGGGCCAAAGACCTGGCAGTGGGTTTCCATTGTCATCACCCACCAAAACAGCCACACCAATTAATTCACATGATTCTGGAGAATTGGATTCAGGTTCAGAATCTGGTAAAGGCAAAGGGGCTTTGGTTGGGAAGGGGAGGGGAGCTTCCCATGGCGCAGGACAGGGAGCTTTTGTTTATGGTGGGGCACAAGTAATAGGCACCGCTGGAAATGTGGGTGTTAGCCATGGAGATCCAAACTTCCCTGCTTTCTTGCCAGTTATGCAATTTGGGGGCCAGCATCCTGGGGGTATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCTCAACTGGGAAAATCAGAAATGACATGGCTACCAGTCTTGGCTGGTACTGCAGGAGCTTTAGGGGCTACATACCCATACCTTGCTGTTGATGGTGCAAGCAGTCACCAATCTGGACAGGCCTCTGCAATGGGTACCTCAAGCAAGGACCATAGTGTTAACAAAGCCAATAATGAATTGAAGCCACCTCAGAAATCTGAGCTTGCAAGTGAAGAGTTTGGACAGAGGCAGAATAAACCCCGAAGATACTCAGAGATGAATTTTGGTCAGTGA 1992 0.4598 MATVVEENNVEYDSDPEDAKRLLTMRRREASDDEEAEGEEVTDKREVGRIEVRSDNLDDEGGVEDYANDGDDVEEGQKELQEEEEEEEEVEEVYEEKGASGGVEVEGPVVVSKESDDDVRPPLEDFTEDHSEEKKESDPFAVPTAGAFYMHDDRFGDNAGTRNRRIHGGGRRLWESKDGKKWGHDKFEQILHEKHYEERRPSKGNYHGRGNGRGTDYRGYVRGSKKGYNSSSNQNQMPKSVVRGRGPQKYERSNKINGPSSQVQNKQSGKSRERNSNVSLERTSTPSSHAESDLVPSKNQVLASNLNSASPPYYPSGSSSNDINLAQKREVKTGGSSRNVGPVAVDEGFPVQQKNALIQGKNVVDSISMSKLYINESTPRSVGKPLNNVRMARPGSSVVNASQSPHPRASGTGRGVSIPVHTNFQRSSSHNKISPSEFQAIQTSSVPGRNSTSVQATAPQLGQRPGSGFPLSSPTKTATPINSHDSGELDSGSESGKGKGALVGKGRGASHGAGQGAFVYGGAQVIGTAGNVGVSHGDPNFPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGKSEMTWLPVLAGTAGALGATYPYLAVDGASSHQSGQASAMGTSSKDHSVNKANNELKPPQKSELASEEFGQRQNKPRRYSEMNFGQ 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00140 663 MobiDBLite consensus disorder prediction 110 139 - -
Vian9g00140 663 Pfam CASC3/Barentsz eIF4AIII binding 128 210 IPR018545 GO:0003729|GO:0006397|GO:0035145
Vian9g00140 663 MobiDBLite consensus disorder prediction 1 20 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 168 205 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 609 663 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 41 60 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 442 489 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 225 241 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 61 94 - -
Vian9g00140 663 PANTHER PROTEIN MLN51 HOMOLOG 1 663 IPR044796 GO:0003729|GO:0006397|GO:0035145
Vian9g00140 663 Coils Coil 66 100 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 442 508 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 253 334 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 609 637 - -
Vian9g00140 663 MobiDBLite consensus disorder prediction 394 420 - -
Vian9g00140 663 SMART Btz_2 92 212 IPR018545 GO:0003729|GO:0006397|GO:0035145
Vian9g00140 663 MobiDBLite consensus disorder prediction 26 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00140 Vian-Chr9 1134461 1138143 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00140 - - gmx:100792594 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00140 9 1134461 1138143 Vian9g00140 9 1134461 1138143 ECH