Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00139 ATGGAGGACTGCAACAGCAGCAAAGGAGAAGTTCATGCAAATTTTACAAAGCAGAAGAACTCTTCAGCAAGATCAGGTATCTGTTTGAAATCTTCGTCATCTGGAAGGTCAACTCCACAAAATTCCCCTTCATTTCAGAGACCACATTCTACCTTAACACCAAGAAGAGAAAGCAAGGGTGTTGCACAGTGCTACGGCAGCAACCGGATACTGTTATGGCTGCTTCTGATAACCCTTTGGGCTTATCTTGGATTTTTTGTACAGTCTAGGTGGGCACATGATGAAAAGGAGGAGGAATTTTCAGGCTTTAGAAGCAGACAAAGGGATGCAACAAAATCCTATGATGAACTGAATCAGCATCATGATTTGATTGCCAAAAACATTTCCTTATCTGTTAAAATCGAACAAGTTGTGAACAAACCAATAGATGTGGCTTTGGCCAAGAAAGAATATGGTGTTCTACCTGAGGTTAAAGCTAGCACAAGGAAAAGAAGAAGGCGACCAATGCATGTTTTGAGAGGTAAGAGGAGGCGAAAACATAAACTTGAGAGTGGTGGTTTGGAGGAGCTGGAGCCAGAGATTCCCCCAAGGAATTCCACCTATGGATTCCTTGTTGGTCCATTTGGTTCGTTAGAGGATAGAATTCTGCAGTGGAGTCCTCAGGGGCGTTATGAAACCTGTAACACCAAAGGGAAATTTGCGCGCCTTGTTTGGTCAAGAAGGTTTGTTCTGATATTTCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTCTTGAGTTGTGAGGCTTCTGTTCATGCTGTGGTGCTTAGCAGGAAGGGTGGTTTGATGCAAGAACTTGCTAGGAGACAAATCAAGGTGCTTGATGACAAAGCATATCACAGCTTCAAAACTGCAGCCAAGGCAGATCTTGTCATTGCTGGATCAGCTGTCTGTGCATCATGGATTGAACAATACATTGAACATTTTCCCGTTGGAGCAAGTAAAGTTGCTTGGTGGATTATGGAAAACAGAAGAGAGTATTTTGATCGTGCAAAGGATATGCTGCAGAGAGTGAAAATATTGATTTTTCTCTCTCAAGCACAATCTAAGCAATGGCAAAAATGGTGTGAAGAAGAAAGCATAAAATTGAGATTACAGCCAGCACTTGTTCCATTGTCTGTCAATGATGAACTAGCTTTTGTAGCAGGCATTCCCTCTACACACAATAATGCATCCTTCAGTGCTGCAAAAATGGATGAGAGAAGAAAGTTGTTGAGAGATTCAGTTCGAAGAGAAATGGGATTGAATGATAATGATATGCTTGTTATGAGTCTGAGTAGCATCAACCGTGGGAAGGGTCAGCTATTTCTTCTTGAATCCGCAAGAACAATTGTAGAAGATGAACCATTGCACCATGATAATAAGAAAATGCCAGTGTCATTTAATGATGGGGAACACCATGATAATAGTAGTGTAGCCTTCAACAATATCTCAAGCACATTTACAAAAAGCAAGGAAGTGTTGTCCAACAACAATGCAACAACTGCACAATCTCTCAAAATTCTCATTGGTTCTGTCGGATCTAAGAGCAACAAAGTGGATTATGTTAAGGATGTTTATGTCATAAACTCTCAGGTGCTTGGAACAGATGCTGGAGGAACGCAAGAAATTGTTGAACATAATGTGACAGGTCTCCTTCATCCTATTGGTCGCACAGGGAACCATGTTCTTGCAGAGCATCTCCGGTTTTTACTTGAAAACAGCTTTGCAAGAGAGAAAATGGGGATAGAAGGAAGAAAAAAGACAGTTACACTAATTCTCTTTGAAAATATGCACTCATCTATGTTTCAGAACATTAAGGATACACACCACGATGTCATTCTTCTCATGTTTGCTATATTGAAAATTGAAAAATGA 1920 0.4083 MEDCNSSKGEVHANFTKQKNSSARSGICLKSSSSGRSTPQNSPSFQRPHSTLTPRRESKGVAQCYGSNRILLWLLLITLWAYLGFFVQSRWAHDEKEEEFSGFRSRQRDATKSYDELNQHHDLIAKNISLSVKIEQVVNKPIDVALAKKEYGVLPEVKASTRKRRRRPMHVLRGKRRRKHKLESGGLEELEPEIPPRNSTYGFLVGPFGSLEDRILQWSPQGRYETCNTKGKFARLVWSRRFVLIFHELSMTGAPLSMMELATELLSCEASVHAVVLSRKGGLMQELARRQIKVLDDKAYHSFKTAAKADLVIAGSAVCASWIEQYIEHFPVGASKVAWWIMENRREYFDRAKDMLQRVKILIFLSQAQSKQWQKWCEEESIKLRLQPALVPLSVNDELAFVAGIPSTHNNASFSAAKMDERRKLLRDSVRREMGLNDNDMLVMSLSSINRGKGQLFLLESARTIVEDEPLHHDNKKMPVSFNDGEHHDNSSVAFNNISSTFTKSKEVLSNNNATTAQSLKILIGSVGSKSNKVDYVKDVYVINSQVLGTDAGGTQEIVEHNVTGLLHPIGRTGNHVLAEHLRFLLENSFAREKMGIEGRKKTVTLILFENMHSSMFQNIKDTHHDVILLMFAILKIEK 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00139 639 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 547 605 - -
Vian9g00139 639 Gene3D Glycogen Phosphorylase B; 545 605 - -
Vian9g00139 639 MobiDBLite consensus disorder prediction 1 58 - -
Vian9g00139 639 Pfam Glycosyl-transferase family 4 238 407 IPR041693 -
Vian9g00139 639 PANTHER BNAA05G14870D PROTEIN 547 619 - -
Vian9g00139 639 MobiDBLite consensus disorder prediction 9 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00139 Vian-Chr9 1126994 1132347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00139 29 613 Glycosyltransferase AT1G52420 50.305 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00139 - - vra:106773827 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00139 9 1126994 1132347 Vian9g00139 9 1126994 1132347 ECH