Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00117 ATGGTGAAGGGCGATTCAAAGAAACATGTTCTCACTGCTTTCACTCCTAATGGGGACTATGCTGCTATTTTGTCTGCCAATGGGACGGCCAAAATTTGGAACACAAGCACTGGACATTTGTTAGCAGAGTGGAAGGCATCAGATGAAGATAATGATCCTCGTTATTCTTGTATTGCATCTAGTTACACAGGAAAAAAGTTTAGAAAAGAACAGGGAACTTTCTTATTAGCTCTTGGCACAATCGATGGAAGAGTTCTTGTTGTTGATGTTTCCACTGGTGACAGAAAGTTGATTACCAGCTATCCCGGGGAGATCTGTGGACTCTCATTTGCAAATAAAGGTCATGTTCTTCGCATTGTTGGACGTAATGGGATGGCATATGAGGTTAACACAGAAACAGGACAGCTTTTAAAGGAATTTAAAGTATCAAAAAAGTCTATCACTTGTCTGGCTTTCTCACATGATGAAAAATATTTAGCTATTGTCAGCTCTAAAATACGGGTTATTAGCTGGGAAATTGGGAAAGAGGTTCTGAAGTTCCCCAATGATTTGGGAAATGTACAACACATTTCTATATCCAATGATGCCAAAAATTTAGTTACATTTGATTTTGAGGGTAAGCACCTTCATGTTTGGAAATGTGATTTAAATTCAGGAAATGTGGGTAAAGGTCCTACACTTCCCCTAAGGCATCCTCCAGTAGCTTTGGACTGCCGCTGTGGTTGCAATAAAGAAGAAGATATCGTTCTTTTGGCAGTTAGTAGTAGAGGTTCTTCTTATATTTGGAATTTGAATGCTTTCTCCGAAGATCGGATGCAACCAACTAAATTAACCACCAAGACCAAAACAGTTGAAACAGACAAGGAAAATGGGGGAAGTTCAAAGAAAAGGCACACCTCAATTATTGCATCCAGATTACAACCTATAGAAGAAGACAAACAGGTTAAAGCTATTGTGACTTATGGCTCTCTGGATCATCCTCAGTTTAGCGTCGTAAATATTAGCAATTCAGGGGAGACAATAGTATTAAATGTAGAAAATGAGACCGATTCTGCTCATCAGCATGGTAGTCCTTCTGGCAAAGCAATATCAATGGAAAGCAAGAAAACTAAGAAAAGACAAGCACCATCTGATCCTGATGTTACAACTGACATGGTGGATTTAGATCAACATGAGGCTGCAGAAGGAGTTCTCCTTGATAATGATTTGGATGAGCCAACAATGGGAGAGAAACTTGCTAGTCTAAGTTTACTGGAAGAGAACAAATTCAGGAGTGACAAAGAGCAAGAAGCTTCTGTCTCAATAAAGCCTCCAAGTGCAGACTCCGTACATGTTTTGATTAAGCAAGCATTAAATGCTGACGATCGCACCCTTTTGCTAGATTGCTTGTATACGCAAGATGAGAAGGTTATTAGAAAGTCAATTGCTCAGTTGAACCCATCCAACGTCCTCAAACTTCTATACTCCCTCATATCCATTATTGAATCTAGAGGTGCAATCTTGGCTTGTGCGCTTCCGTGGTTGAAGTATCTACTTCTACAGCATGCGAGCGGAATATTGTCCCAGGAATCGTCATTAAAAGCTTTGAACTCTTTGTATCAACTGATTGAGTCTAGAGTCTCCACTTTTAAATCTGCCATCCAACTCTCAAGTTGCTTAGACATTCTTTACTCAGGGGTTATTGTTGAGGAGGACGATGAAGATGAAACAGTGCCAGTTATCTTTGAGGATAAGGATAGTAGTGAAGAAGAATCCGATGAAGAGGCCATGGAAACTGGCCAAGATATCACAGATGAAGAAGAATCAGAACAAGAACTTGATGGTGCAAGTGATATGATGGAAGATTGA 1848 0.3988 MVKGDSKKHVLTAFTPNGDYAAILSANGTAKIWNTSTGHLLAEWKASDEDNDPRYSCIASSYTGKKFRKEQGTFLLALGTIDGRVLVVDVSTGDRKLITSYPGEICGLSFANKGHVLRIVGRNGMAYEVNTETGQLLKEFKVSKKSITCLAFSHDEKYLAIVSSKIRVISWEIGKEVLKFPNDLGNVQHISISNDAKNLVTFDFEGKHLHVWKCDLNSGNVGKGPTLPLRHPPVALDCRCGCNKEEDIVLLAVSSRGSSYIWNLNAFSEDRMQPTKLTTKTKTVETDKENGGSSKKRHTSIIASRLQPIEEDKQVKAIVTYGSLDHPQFSVVNISNSGETIVLNVENETDSAHQHGSPSGKAISMESKKTKKRQAPSDPDVTTDMVDLDQHEAAEGVLLDNDLDEPTMGEKLASLSLLEENKFRSDKEQEASVSIKPPSADSVHVLIKQALNADDRTLLLDCLYTQDEKVIRKSIAQLNPSNVLKLLYSLISIIESRGAILACALPWLKYLLLQHASGILSQESSLKALNSLYQLIESRVSTFKSAIQLSSCLDILYSGVIVEEDDEDETVPVIFEDKDSSEEESDEEAMETGQDITDEEESEQELDGASDMMED 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00117 615 PANTHER OS03G0300300 PROTEIN 6 604 - -
Vian9g00117 615 MobiDBLite consensus disorder prediction 571 615 - -
Vian9g00117 615 Gene3D - 4 303 IPR015943 GO:0005515
Vian9g00117 615 Pfam Dip2/Utp12 Family 455 556 IPR007148 -
Vian9g00117 615 SUPERFAMILY WD40 repeat-like 13 266 IPR036322 GO:0005515
Vian9g00117 615 MobiDBLite consensus disorder prediction 274 300 - -
Vian9g00117 615 SMART WD40_4 173 213 IPR001680 GO:0005515
Vian9g00117 615 SMART WD40_4 4 34 IPR001680 GO:0005515
Vian9g00117 615 SMART WD40_4 133 170 IPR001680 GO:0005515
Vian9g00117 615 MobiDBLite consensus disorder prediction 349 364 - -
Vian9g00117 615 Pfam Anaphase-promoting complex subunit 4 WD40 domain 75 153 IPR024977 -
Vian9g00117 615 MobiDBLite consensus disorder prediction 281 295 - -
Vian9g00117 615 MobiDBLite consensus disorder prediction 349 383 - -
Vian9g00117 615 MobiDBLite consensus disorder prediction 365 383 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00117 K14546 - gmx:100792757 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00117 9 897584 902093 Vian9g00117 9 897584 902093 ECH