Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00115 ATGAGCAGACCGGGAGACTGGAACTGCAGGTCATGCCAGCACCTGAACTTTCAGAGGAGAGATTCATGCCAGCGATGTGGGGACTCAAAATATGGAGATAGAATTGATTTTGGTGCGTTTGGAGGAAGAGGAGGGTCTTCGTTTGGGTTAACTGGGTCAGATGTTCGTCCTGGTGACTGGTACTGTGCTGCTGCTAACTGTGGGGCTCACAACTTTGCTAGCCGCTCAAGCTGCTTCAAGTGTGGTGCTTTCAAGGATGACTTGGCTGGAGGCTACAACAGTGACATCTTGCGCTCAAGAGCTTTTGGTGGCAGTGGAAGACCTGGCTGGAAATCTGGTGATTGGATATGCAGCAGTTGTACTTCCTGA 369 0.5068 MSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDRIDFGAFGGRGGSSFGLTGSDVRPGDWYCAAANCGAHNFASRSSCFKCGAFKDDLAGGYNSDILRSRAFGGSGRPGWKSGDWICSSCTS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00115 122 Gene3D - 2 32 - -
Vian9g00115 122 Gene3D - 51 87 - -
Vian9g00115 122 PANTHER ZINC FINGER PROTEIN 54 120 - -
Vian9g00115 122 Pfam Zn-finger in Ran binding protein and others 56 83 IPR001876 -
Vian9g00115 122 Pfam Zn-finger in Ran binding protein and others 3 28 IPR001876 -
Vian9g00115 122 ProSiteProfiles Zinc finger RanBP2 type profile. 56 87 IPR001876 -
Vian9g00115 122 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Vian9g00115 122 SMART zf_4 5 29 IPR001876 -
Vian9g00115 122 SMART zf_4 58 84 IPR001876 -
Vian9g00115 122 SUPERFAMILY Ran binding protein zinc finger-like 51 86 IPR036443 -
Vian9g00115 122 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Vian9g00115 122 ProSitePatterns Zinc finger RanBP2-type signature. 60 81 IPR001876 -
Vian9g00115 122 FunFam Ran-binding zinc finger protein 50 87 - -
Vian9g00115 122 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00115 Vian-Chr9 890516 891584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00115 - - gmx:100499847 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00115 9 890516 891584 Vian9g00115 9 890516 891584 ECH