Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00114 ATGGCGTCGTTATTCTCTGCAACTGCAACCGTTATTCCTCGAAACCTCGCCGTCGCTTCTTCCGCCAAACACCCCGTCGGTCATTCTCTTCCTAATTCTTATTCTCCGCCCTTCCTCTCATTCCCCACTTCCAAATCAAACCCTCGCATTCGCCTCACCGCTTCTCTCCAATCCCCACCCGCCCACGCCAGCGCGTCTTCCTCTCCCTCCGCCACCTTCCACGGCCTCTGCTATGTTGTCGGCGACAACATCGACACCGACCAGATCATCCCCGCGGAATACCTCACCCTCGTTCCTTCCAAGCCCGACGAGTACGAGAAGCTCGGCTCCTACGCCCTAGTCGGCCTCCCCGCCTCCTACGCCACGCGTTTCGTTGAACCCGGCGAGACCAAGACCAAGTATGCCATCGTCATCGGCGGCGCCAACTTCGGCTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCGTTGGGCGCCTCCGGCGCTGCCGCCGTTGTCGCGGAGTCGTACGCGCGGATCTTTTTTCGGAACTCGGTGGCCACAGGCGAGGTGTACCCGCTGGAGTCGGAGACCCGCCTGTGCGAGGAGTGCCGCACCGGTGATGTTGTCACGATTGAGCTCGGAGAGAGCCGCTTGATCAATCACACCACTGGAAAGGAGTATCGGTTGAAGCCGATCGGCGACGCGGGTCCGGTGATTGAGGCTGGTGGCATCTTTGCCTATGCGAGGAAGTCCGGCATGATTCCCTCTCGTTAG 753 0.6135 MASLFSATATVIPRNLAVASSAKHPVGHSLPNSYSPPFLSFPTSKSNPRIRLTASLQSPPAHASASSSPSATFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALVGLPASYATRFVEPGETKTKYAIVIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESETRLCEECRTGDVVTIELGESRLINHTTGKEYRLKPIGDAGPVIEAGGIFAYARKSGMIPSR 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00114 250 NCBIfam 3-isopropylmalate dehydratase, small subunit 77 243 IPR011827 GO:0016836
Vian9g00114 250 FunFam Isopropylmalate/citramalate isomerase small subunit 70 246 - -
Vian9g00114 250 CDD IPMI_Swivel 79 206 IPR033940 -
Vian9g00114 250 Pfam Aconitase C-terminal domain 133 181 IPR000573 -
Vian9g00114 250 SUPERFAMILY LeuD/IlvD-like 73 247 - -
Vian9g00114 250 Gene3D Aconitase, domain 4 70 246 IPR015928 -
Vian9g00114 250 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 69 248 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00114 K01704 - gmx:100809737 374.4