Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00108 ATGAAGGACAACGGTGTTGAAAACCCTCTTCGCCTTCAGTCTGTAAATCATATCTCCCTCATATGCAGATCAGTGGAAGAATCAATGGATTTCTACCAGAACGTTCTAGGATTTTCCCCAATCAGGAGGCCTGGTTCTTTTGATTTTGATGGGGCATGGCTATTCGGCTACGGTATCGGAATTCATCTGCTAGAAGCAGAGAACCCAGAAAAGTTGCCAAAGAAGAAGGAAATTAACCCAAAGGATAATCATATATCTTTTCAGTGTGAGAGCATGGGAGCTGTGGAGAAGAAGCTGAAGGAGATGGAAATTGCTTATGTGAGAGCAACAGTGGAGGAAGGAGGTATTCAAGTGGACCAGCTATTTTTCCACGACCCTGATGGATTCATGATCGAAATATGTAACTGTGATAGTCTCCCTGTGATTCCCTTGGTTGGTGAAGTGGCAAGATCATGTTCCCTTGTGAATCTTGAGAAAATGCAGAATCAGCAGCAGATACAAAACATGCTTCAGAAACTCTGA 522 0.431 MKDNGVENPLRLQSVNHISLICRSVEESMDFYQNVLGFSPIRRPGSFDFDGAWLFGYGIGIHLLEAENPEKLPKKKEINPKDNHISFQCESMGAVEKKLKEMEIAYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARSCSLVNLEKMQNQQQIQNMLQKL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00108 173 Gene3D - 3 173 IPR029068 -
Vian9g00108 173 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 136 IPR037523 -
Vian9g00108 173 CDD VOC_like 15 133 - -
Vian9g00108 173 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8 135 IPR029068 -
Vian9g00108 173 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Vian9g00108 173 PANTHER - 7 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00108 Vian-Chr9 855022 856277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00108 - - pvu:PHAVU_010G154400g 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00108 9 855022 856277 Vian9g00108 9 855022 856277 ECH
Vian11g00106 11 915494 916357 Vian9g00108 9 855022 856277 PCT