Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00107 ATGGAAGCAATCACGGAGGGAGTGAACAACATCAATATCACCGAAACTTACAAGAAGAATCGTATTCAGGTCTCCAATACTAAAAAGCCTCTCTTCTTTTACGTTAATCTCGCCAAGAGGTACATGCAACAGCATAACGAAGTCGAGCTCTCAGCACTGGGAATGGCTATTGCTACAGTTGTTACTGTTGCAGAAATCTTGAAAAACAATGGGCTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGACATAAAAGATGATTCCAGAGGAAGACCTGTCCAGAAGGCCAAGATTGAAATATTGTTGGGAAAGACTGCAAACTTCGATGAGTTGATGGCTGCAGCAGCTGCTGAAGATGGTGAAAATGGAGATGCTGAAGAGCAAACAACTTAG 396 0.4167 MEAITEGVNNINITETYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAEDGENGDAEEQTT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00107 131 FunFam Uncharacterized protein At2g34160 18 130 - -
Vian9g00107 131 PIRSF UCP030333_Alba 1 131 IPR014560 -
Vian9g00107 131 Gene3D - 18 130 IPR036882 GO:0003676
Vian9g00107 131 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 122 IPR014560 -
Vian9g00107 131 Pfam Alba 20 75 IPR002775 GO:0003676
Vian9g00107 131 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00107 Vian-Chr9 847188 849210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00107 - - gmx:100527472 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00107 9 847188 849210 Vian9g00107 9 847188 849210 ECH
Vian11g00105 11 906151 908361 Vian9g00107 9 847188 849210 PCT