Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00096 ATGGAGAGCGAACCGCAGAGTGCAGGAAAAGATGAGGTTTTATCGGTTGAGCTATCGGCCCCTTCTGCTTGGAAGAAACTGTTCTTCCCTAAGAAAGTAGGAACACCAAGGAAAAGTGAGATTGTATTCGTAGCTCCTACTGGGGAAGAGATCACTTCCAAAAAGCAGCTGGAGCAGTACCTAAGGGCACATCCTGGGAATCCTGCCATCTCGGAGTTTGACTGGGGAACCGGTGAGACCCCTCGGCGATCGGCACGGATTAGCGAGAAGGTCAAATCGACTCCACCGGAGACCGAGCCTCCGCGGAAAAGATCCCGGAAATCATCAGGTTCTTCAAAGAAGGATAGCAAAGAAAACGAACCCGCAGCCGAAGAATCGAAACCAGATCCTGCTGAAACTGATAACAACAACGTAAAAAAGACTGATACAGAGGAGATTGATAACAGTAATGCCGAAGTGCAAAATGCAACAGCTGAAAAACCTGAGGGAGGAGAAGAAGCATTGGTAGAGTCAGAGGAGAAATTTGCAGGGGAAGCTTTAAATACTGAGGAGGTAACTGAAAAACCCCAAGAGAAGGAGGAGATCACTGAGAAGCCTGAGGAGCAGGAGGGCATTGAAAAACCCCAAGAGGTGGATGAGGCAGCAGGAACTGCATCAGGAAAAGAAAATGGCACAGTTGATGACAGGAAGCAAGACATAGCTGATAGTGTGATTCCTGATGCGAATGGAGGAGCTGAGAAAGTGAAGCTGAACCCAGATGTTGAGGAAAAGAACGGTATAACAGAAATCCCTGTAAGTGATGGAAAGAACAGCATTCAAGCTGAGGAGCAAGTAAATAAAATGGTTGACAACGGACAAGTTATCTGGAGCTGTGCTCAGTGA 882 0.4739 MESEPQSAGKDEVLSVELSAPSAWKKLFFPKKVGTPRKSEIVFVAPTGEEITSKKQLEQYLRAHPGNPAISEFDWGTGETPRRSARISEKVKSTPPETEPPRKRSRKSSGSSKKDSKENEPAAEESKPDPAETDNNNVKKTDTEEIDNSNAEVQNATAEKPEGGEEALVESEEKFAGEALNTEEVTEKPQEKEEITEKPEEQEGIEKPQEVDEAAGTASGKENGTVDDRKQDIADSVIPDANGGAEKVKLNPDVEEKNGITEIPVSDGKNSIQAEEQVNKMVDNGQVIWSCAQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00096 293 Gene3D - 12 85 - -
Vian9g00096 293 MobiDBLite consensus disorder prediction 83 147 - -
Vian9g00096 293 Coils Coil 139 159 - -
Vian9g00096 293 SUPERFAMILY DNA-binding domain 9 102 IPR016177 GO:0003677
Vian9g00096 293 Pfam Methyl-CpG binding domain 18 79 IPR001739 GO:0003677
Vian9g00096 293 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Vian9g00096 293 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 269 IPR039622 -
Vian9g00096 293 MobiDBLite consensus disorder prediction 163 210 - -
Vian9g00096 293 MobiDBLite consensus disorder prediction 62 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00096 Vian-Chr9 770727 773076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00096 - - vun:114166886 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00096 9 770727 773076 Vian9g00096 9 770727 773076 ECH