Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00092 ATGGCTCTCATCACCACTCAACCTAAAAACCCCATTTATAATGGCTGCACCACCCTTCACCGCTCAATCCCACGGCGGGGCAATACTACTGTTCTTGGCCTTGGCTCCGTTAAAAACTTTAACTTTAACCGAAAACAAAGCAAAATTTCCCTTAAAAGCAATCCCTTTACCTATAATTTGGCAGTGACAGCCAAAGCCAATGCAGGATTCGGAGAAGGTTTGGAGGGTGAGTCATTGAAACACAGAAAGATTTTATTGTCTGAAGTTGAGGTGAAGAGAGAGAGAAGTGTTTTGTTTGGGAGAAAATGGAGCTCTTTGGATGTTGGCACTGCTGGGATTGTGTTGGCAATGCATGTGCTTTGCCTCTTTGCTCCATTCCATTTCAATTGGCCTGCATTTTGGGTGGCTGTGGCTCTCTATGTTGTCACTGGCCTTTTTGGCATCACTCTTTCTTTCCACAGGAACCTTTCTCATAGGAGTTTCAAGCTTCCCAAATGGCTTGAATATTCCTTTGCCTATTGTGGGGTTCTGGCACTTCAGGGGAACCCAATTGATTGGGTAAGCACACATAGATACCATCACCAGTTTTGTGACACTGAGAGAGACCCTCATAGCCCCACCGAAGGGTTCTGGTTCAGCCATATGAGTTGGCTCTTTGATACCAATTCCATCGTAGAAAGGTGTGGAGAGCCAAACAATGTTGGTGATTTAGAGAAACAACCTTTTTATAGATTTCTCCGAAGCACTTACCTTGTCCACCCCTTTGCTTTGGGAGCCCTTCTATATGCAGCTGGAGGATTTCCTTTCCTAGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTATCACATAACCTGGTTTGTAAACTCAGCTTGCCATGTTTGGGGGAATCAGGCCTGGAACACCAGGGACCTGTCCAGAAATAATTGGTGGGTGGCGTTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCTTTTGAGTATTCAGCTCGACATGGACTAGAATGGTGGCAACTAGACATGACTTGGTACGTTGTGAGATTTCTCCAAGCTATTGGGTTGGCCACTGAAGTCAAGTTACCCTCAGAGACTCAGAAGCAGAGAATGGCATTCAATAATCATACAATAATCACATGA 1143 0.4506 MALITTQPKNPIYNGCTTLHRSIPRRGNTTVLGLGSVKNFNFNRKQSKISLKSNPFTYNLAVTAKANAGFGEGLEGESLKHRKILLSEVEVKRERSVLFGRKWSSLDVGTAGIVLAMHVLCLFAPFHFNWPAFWVAVALYVVTGLFGITLSFHRNLSHRSFKLPKWLEYSFAYCGVLALQGNPIDWVSTHRYHHQFCDTERDPHSPTEGFWFSHMSWLFDTNSIVERCGEPNNVGDLEKQPFYRFLRSTYLVHPFALGALLYAAGGFPFLVWGMGVRIVWVYHITWFVNSACHVWGNQAWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWQLDMTWYVVRFLQAIGLATEVKLPSETQKQRMAFNNHTIIT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00092 380 Pfam Fatty acid desaturase 130 349 IPR005804 GO:0006629
Vian9g00092 380 PRINTS Fatty acid desaturase family 1 signature 275 296 IPR015876 GO:0016717
Vian9g00092 380 PRINTS Fatty acid desaturase family 1 signature 153 173 IPR015876 GO:0016717
Vian9g00092 380 PRINTS Fatty acid desaturase family 1 signature 190 219 IPR015876 GO:0016717
Vian9g00092 380 PRINTS Fatty acid desaturase family 1 signature 318 332 IPR015876 GO:0016717
Vian9g00092 380 CDD Delta9-FADS-like 129 361 IPR015876 GO:0016717
Vian9g00092 380 PANTHER ACYL-COA DESATURASE 82 370 IPR015876 GO:0016717
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00092 1 375 Lipid Metabolism Gene Families AT3G15850 65.263 5.39e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00092 K20416 - gmx:100786391 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00092 9 742402 744130 Vian9g00092 9 742402 744130 ECH