Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00084 ATGGAGCTTGATGCTCATGTTACCCCCGATAATAATGATGTGATACCTTATTCAGGAACGCAACCCAATAAGCGGATGAGAAAAAAGTCTATGGTGTGGGAATACTTCACAGTAGAAGCTGTTGGAGCTGGATGTACCAGGGCTTACTGTAACCAGTGCAAAAAGTCATTTTCTTATATAACTGATTCAAAACTAGCTGGTACAAGCCATCTGAAACGACACATTTCGATGGGAATCTGTCAAGTACTTCGGGAGAAAAACCAACAAATCTCATATCCCAAAACAGATGGTTCTCAATATAATGCCAATCCTCCCAAGAAACGGCCAAGAGAGAATTCTAGGTTTACTAATGGTATCTCATTTGATCAGGAGCGTTGCAACCATGATATTGCCAAAATGATAATTTTACATGATTATCCTCTTCATATTGTGAAGCAACAGGGTTTCATTGATTTTTTGCGGATTCTTCAACCCCAGTTCAATCCATCATGTCTAAATTCTATTGAAAGGGATTGTATTGGTATTTACCTCAGGAAAAAGCAAAATATGTTGAATGTCATTAATGTGATTCCTGGACAAGTCAACCTGACAATGGAATTGTGGACTTCCAACCAGGCAATGGGCTATGTTTTTGTTCGAGGACACTTCATTGATAGTGATTGGAACTTGCATCGTCCTATTCTCAATGTCGTTACAGTACCATTTCCTGGTTCTGAAGATTCTTTAAATCAAACTTTAGTGACATGCTTATCCGATTGGCATTTGGAGGGTCGGCTGTTTACTCTTGCGCTTGATAAATCCTTTTCCAGTGAGAATGTGATAGAAAATCTGAGAGGCCTGCTCTCTGTTAAGAACCCTGCCACACTCAATGGTCAGTTGTTAAACCAGAATTGCTATGCTTGTGTGCTTAGTCGCCTTGCAGCTGATGCACTATGGGCAATGAGAGAAACTATTAGCAAGGTTCGCGATAGTGTGAAGCATGTGAAGTCTTCAGAAACCCATAAAGAGAAGTTTATTGACTTGAAGCAACATTTACAAGTACCTAGTATGGTGAATCTTTCAATTGATGACCCGTGTAAATGGGACACAACTTATCATATGCTTGTAGCTGCCTGTGAATTAAAGGAAATCTTCATCTGCCTTGATACCACTGATTCTGATTACAGAATGACTCTAACAATGGATGACTGGAAGCAGGTTGAAACTCTCTGTACATATTTGAAGTATTTGTATGATGCAGCCAAAATTCTGACACAGCAACCGTACCCAACTTCAAATTTATTTTTTGCTGAAGTGTCAAAAATTCAGGTGGAGCTGACACAAGCAGTCTTCATCCAGGATCCTTTCATAAGAAGTTTAATTTTTCCTTTGCACGAGAACTTTGACCAATATTGGAGAGAAAGCTGCATCATCTTGGCAATTGCTGTAACTATGGACCCAAGGCATAAAATGAAACTTGTGGAATTTACCTTTGCCAAGACATTTGGTGAGAATGCTGGGGCCTGGATAAAGATAGTTGAGGATGGTCTTCGTGATCTATTCATTGAATATAGCACCCAAATGTTTCTTAAAGCAACAAATGATGATGATGGGGATGACATTATGATAAAAGAAACATGTCAAGAAGATTCTATTGACTGCTCTCTTTTTGTTGATGGTGATGGTCTTTCGGATTATGAATTTTATATATCTGATTTTACTGGTAACCCTCAATTTAAATCAGAATTGGAAGAGTATCTGGAAGAGCCTCTGCTGACCAGTGTAGAGGAATTTGATATTCTGAACTGGTGGAGAGTAAATGGATTGAAATACCCGACATTGTCTAGAATAGCATCTGATATTTTGTCTTTACCAGTTTCCACATTGTCTGCAGATTCTGTTTTTGACACCCGGATTAGAAAAATGGATAGCTACCGTAGTTCTTTAAGCTCTCTCACTCTTGAAGCCCTTATTTGTGCCAAGGACTGGTTCCAGTCAGAATGA 1983 0.3903 MELDAHVTPDNNDVIPYSGTQPNKRMRKKSMVWEYFTVEAVGAGCTRAYCNQCKKSFSYITDSKLAGTSHLKRHISMGICQVLREKNQQISYPKTDGSQYNANPPKKRPRENSRFTNGISFDQERCNHDIAKMIILHDYPLHIVKQQGFIDFLRILQPQFNPSCLNSIERDCIGIYLRKKQNMLNVINVIPGQVNLTMELWTSNQAMGYVFVRGHFIDSDWNLHRPILNVVTVPFPGSEDSLNQTLVTCLSDWHLEGRLFTLALDKSFSSENVIENLRGLLSVKNPATLNGQLLNQNCYACVLSRLAADALWAMRETISKVRDSVKHVKSSETHKEKFIDLKQHLQVPSMVNLSIDDPCKWDTTYHMLVAACELKEIFICLDTTDSDYRMTLTMDDWKQVETLCTYLKYLYDAAKILTQQPYPTSNLFFAEVSKIQVELTQAVFIQDPFIRSLIFPLHENFDQYWRESCIILAIAVTMDPRHKMKLVEFTFAKTFGENAGAWIKIVEDGLRDLFIEYSTQMFLKATNDDDGDDIMIKETCQEDSIDCSLFVDGDGLSDYEFYISDFTGNPQFKSELEEYLEEPLLTSVEEFDILNWWRVNGLKYPTLSRIASDILSLPVSTLSADSVFDTRIRKMDSYRSSLSSLTLEALICAKDWFQSE 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00084 660 MobiDBLite consensus disorder prediction 1 21 - -
Vian9g00084 660 PANTHER BED FINGER-RELATED 171 659 IPR045259 -
Vian9g00084 660 SUPERFAMILY beta-beta-alpha zinc fingers 30 85 IPR036236 -
Vian9g00084 660 MobiDBLite consensus disorder prediction 92 115 - -
Vian9g00084 660 SUPERFAMILY Ribonuclease H-like 191 658 IPR012337 -
Vian9g00084 660 Pfam hAT family C-terminal dimerisation region 575 657 IPR008906 GO:0046983
Vian9g00084 660 ProSiteProfiles Zinc finger BED-type profile. 27 87 IPR003656 GO:0003677
Vian9g00084 660 MobiDBLite consensus disorder prediction 92 106 - -
Vian9g00084 660 SMART bed5 27 83 - -
Vian9g00084 660 Pfam Domain of unknown function (DUF4413) 419 517 IPR025525 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00084 Vian-Chr9 696048 698030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00084 - - vun:114166194 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00084 9 696048 698030 Vian9g00084 9 696048 698030 ECH