Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00081 ATGCCCCCAAGATCAGGAAAAGGGAAATCCAATAAAGCAAAGGCAGATAAGAAGAAAAAAGAAGAAAAAGCAGCATCACCTTCTCTTGTTGACATAACTGTGGTGACTCCATATGATGCAGAGATTCTTTTGAAGGGTATCTCTACTGATAAGATTCTTGATGTGAGGAAACTATTGGCTGTGAAGGTGGAGACATGCCATTTCACAAACTATTCTTTATCTCATGAGGGTAAAGGTCATAAATTGAATGACAGAGTGGAAATTGTGAGCCTAAAGCCATGTGTTCTGAGAATGGTTGAAGAGGATTACACAGAGGAGGCCCAAGCAGTTGCGCACGTGCGGAGGGTCTTGGACATTGTGGCCTGCACAACAAGGTTCGGTAGGCCCAAACGGAGTTTACCAAGCCCAGAATCGAGACCCAAGAAAAACGGGAAGGCCCAACATCAGAACAAGACGAGTTTGAGCCCACCCGAGACACCGAATGGGGAATCCAGGGTCGGGTCACCGTCGTCGGAGGCGCCACCGTCGGCGATCTCCGACAATGTGGGAATGAAGGCCATTCACCCGACGCCGAAGCTCTCAGACTTCTACGAGTTCTTCTCGTTGTCTCACCTCTCTCCCCCCATTTTACAATTGAAGAGATGTGAAGGGAAGGATGAAGATGATAGGCGCAAAGGGGATTACTTTCAGCTTCAGGTTAAAATATGCAATGGGAAGGTAATAGAAGTGGTTGTTTCAGAGAAAGGGTTTTACACTGTGGGGAAGCAATCTCTGCACAGCCACACCTTGGTTGATCTTCTCCAACAGCTCAGCCGAGCCTTTGCTAATGCATATGAATCGTTGATGAAAGCCTTTTTGGAACGTAATAAGTTTGGAAATCTTCCCTATGGATTCCGAGCAAATACATGGCTTGTCCCTCCATCTGTGGCTGAGTCTCCTTCAAGCTTTCCTGCATTGCCCGCAGAGGATGAAAACTGGGGTGGTAATGGTGGCGGCCAAGGAAGAAATGGCGAATTCGATCTTAGACCGTGGGCAACGGATTTTGCAATATTGGCCTCTCTTCCTTGCAAAACTGAGGAGGAGAGAGTAGTCAGGGATAGAAAAGCATTTCTGCTTCATAATCAATTTGTTGATACCTCAATATTTAAGGCTGTTGCGGCTATACAGCACGTCATAGAGTCCAACTCAAACATGAAGAGTCAATTGAATTCTTCTCTAGGTGCTGTTCTGCATGAAGATCGTGTGGGAGACTTATCCATTGTAGTCAAACGTGACATCCAGGATGGAAATAAAAAGCATGATTCTATGCAAGTTGAATCTATCATGCAAAAGGATGATGTTCAGAAGAATTTAATCAAAGGATTGACAGCTGATGAAAGTGTAGTTGTTCATGATACTTCTTCCTTGACTGTCGTTGTTGTACACCACTGTGGATATACTGCAACAGTAAAGGTTGTGGGTAATGTGAACATGAGGAAGCCTAAAGTTCGAGACATTGAGATAGATGATCAGCTAGATGGTGGGGCAAATGCTCTCAACATCAACAGTTTGAGGATGCTGCTTCACAAGTCTGGATCTGATTCATTAGAAGGGAATGTATCATCCCAATCAATTTTGGATGACGAAGATGCTACTAAAAGCCTTGTTCGAAAGGTTATTCAAGAAGGCATAGAGAAAATAAAGGAGGAGCCAAGTATTTCAAAAAGGTCTATTCGGTGGGAACTTGGTTCCTGTTGGATGCAGCATTTGCAAAAACAGGAAACTTCATCTGATAACTGTTCCAAAAACAAAGAAGATGGGAATGACGTTGAGCAAGCTGTTAAAGGTCTTGGAAAGCAATTTAAATTTTTGAAGAAGAGAGAGAAGAAATCAAATAATGTAGACGGTACAGATTCTCGAGAGCAAAATGACTCTAGCCCTGGAGATGTGAATGACAATGCTGATAAAGTTGAGCCGAACAGTGGTGACATTAGTAACTCTAGTGAATTAGAGAAACTACTTTCTAACGAAGCATTTTTGCGTCTCAAAGAATCTGGAACTGATCTTCATACGAAGTCAGTGGATGAGCTTATCAACATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGCTATGGACTTTGGATCACTTGAACTTTCTCCTGTGGATGGGCGAACACTGACCGACTTTATGCATTTAAGAGGCTTAAAGATGCGATCTTTGGGTCAAGTGGTTAAACTTGCTGAGAATCTTCCTCACATACAATCCCTTTGTATTCATGAGATGATTACTCGAGCTTTCAAGCATCAACTTAAAGCAGTTATTGCCTCTGTTGAAAATGTAGCTGATCTATCTGCAGCCATTGCATCAACACTAAATGTCTTACTTGGTGGGAGTCGAACAGAAGATAATGATCAAAGTTTGAATGATGATCATAGTCTCAGAATTCAGTGGCTACGAATGTTTTTGTCCCAAAGATTTGGGTGGATACTGAATGATGAATTTCAACATTTGAGGAAGTTGTCGATTCTCAGAGGGCTATGTCACAAGGTTGGATTGGAATTATTCCCTAGAGATTATGACATGGAGTCTATTAAGCCCTTTGGGAAAAATGATATTATCAGCTTGGTTCCTGTTTGCAAGCATGTAGGGTGTTCCTCAATAGATGGACGCAATTTGCTGGAGGCTTCAAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTGGCTAAAATGATGGTTGTTTGTGGACCCTATCATCGAAATACTGCTAGTGCATATAGTCTCCTAGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGCCACCATTTATCAGCAAAAGGCCTTGGATATAAATGAGAGGGAGCTTGGTCTTGACCACCCTGACACTATGAAAAGCTACGGGGATCTTTCTGTTTTCTATTATCGTTTGCAACACATTGAGCTGGCTCTGAAGTATGTTAATCGCGCTCTATTCCTTCTTCACTTTACATGTGGGCTGTCTCATCCAAACACAGCTGCAACATATATAAATGTGGCTATGATGGAAGAGGGCATGGGAAATGTTCATGTGGCACTCAGATACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCAGCTAGCTACCACGCCATAGCTATAGCTCTTTCATTGATGGATGCATTCTCTCTGAGTGTGCAACATGAGCAAACTACACTAAAGATACTTCAAGCAAAGCTTGGATCAGAAGACCTTCGTACACAGGATGCTGCGGCTTGGCTTGAGTATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCACCTTAGCGTGTCAGATCTCCTGGATTTTATCAGTCCTGATCCGAAAAGAAACGATGCACAGAGAAAACAGAGGCGTGCAAAGCTGCTCCCAACAAGTGATAACAGTCAAGAACATGAAGATGCAGTAGCTGAGGAGAGCATTGTTTTTTATGACTCAAGAGATGCTCCAAGCATGGTAGAAGAGAATATAGAAGAAACCAATGACACACGTGATTCTCAAATACCAAAAGAAAATAGTGATTTCACTAGTTACAGGCCAGTGACAAGTGAAGTTGTTTATGAGGCCTCATCCGATGAGGGTTGGCAAGAAGCAAATTCAAAAGGGCGATCAGGAAATGCTACTAACCGCAAGTTTGGCCACAAAAAGCGGCCTCTTCTATCAAAGCTCAGCATCAATGGTTCTAATAATTACATTTACAGGGAAAGCAGTTCTAGGAATGAGATTACTTCACCACCACAAAGAGGAGTTCCTAGAGCAATGTCCGACATGTCATCTCCGTCTAGACAACCAAAAGCTCGAAACATTGCTTTGAACGAGGATGCTGTTAATTATCCAACAAAAACTTCTGTGTCAAAAATTTCATCTCCAGCATCTCTAAGTTCCTTGGCTTCAAAGTCTATATCTTACAAAGAAGTAGCTCTGGCTCCACCAGGTACAGTTTTAAAGCCACTGTTGGAAAAGACTGAGATGGACAAGATTAATGCTGAAGATGAGATATCCAGCAGTCTACCTGTGACATCAACCAACGAAGGTACGTTCCGAAGTTCCATAGTTAATGCAGTTTCTCAGCATGATGAAACAGAGGAAACTCAAGAAATCGAACCTCAACAAGAAAATTCTGCATTGGAAGTTGAGAAGGTTTCCCTTGCTTCTTCTGATCAGGAAAAACCCACAGAAACAAATGGTAGTAAGCTTTCAGCTGCAGCCAAACCTTTCAATCCAGGAATGTTGTCCATGTCTCACCATTTAAATTCAGGTTCCTTCACTAGCATGTATGATACAGATGTTAGTCAAGGCATGAATGTGGAGCCTGTGTTTCCCCCTGCTGTTGCTAGGGTCCCTTGTGGACCTAGATCACCTCTATATTACAGAACCAACTATACTTTCCGCATGAAACATGGTTTTAGTAAAAGCCAAACACCTATAGGAGAAAGAAGCGGATTTGGATCTCCAAGAATTATGAATCCTCATGCGCCTGAGTTTGTTCCAAGAAATGCTTCTCAGATAGAAGCCAATGATTCCAATTCAAATGTTTCCGATGAGCATAACTCTTTATCTGAGGTAAGCATGGCAGAAAAACATAAGCTAGATGAAAATTTCTCTGAAATCAAGGCCAGTTCCGCAAAAAACAGTATTTCTGAATCTGAGAAGTCCGAGATAGCAAGGCAGATATTGCTCAGTTTTTTAGTGAAATCTGTCAAGGAAAATATTGACTCTGTGGATGAGTCTAACGAAAGTGAAGGAAAAGTTGGGAAGTTGGAAAATTGTGATGATGAAATAGCTAAAGACAGTGCTGTCATAAACATTACGTATGGAAATGAAGAAAAGAGTAAGGCAGTGCCTCAATCCAGTGATAGTGATGAGCAAGAGACATTAGGTGTTAGTGAAAAAAAGAACAGTGATGAAGGGTTCATAGTTGTCTCAAAGAGGAGGAAAAACAGGCAGAAGATCACAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCATCAGTTCGTTAA 5124 0.4194 MPPRSGKGKSNKAKADKKKKEEKAASPSLVDITVVTPYDAEILLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEGKGHKLNDRVEIVSLKPCVLRMVEEDYTEEAQAVAHVRRVLDIVACTTRFGRPKRSLPSPESRPKKNGKAQHQNKTSLSPPETPNGESRVGSPSSEAPPSAISDNVGMKAIHPTPKLSDFYEFFSLSHLSPPILQLKRCEGKDEDDRRKGDYFQLQVKICNGKVIEVVVSEKGFYTVGKQSLHSHTLVDLLQQLSRAFANAYESLMKAFLERNKFGNLPYGFRANTWLVPPSVAESPSSFPALPAEDENWGGNGGGQGRNGEFDLRPWATDFAILASLPCKTEEERVVRDRKAFLLHNQFVDTSIFKAVAAIQHVIESNSNMKSQLNSSLGAVLHEDRVGDLSIVVKRDIQDGNKKHDSMQVESIMQKDDVQKNLIKGLTADESVVVHDTSSLTVVVVHHCGYTATVKVVGNVNMRKPKVRDIEIDDQLDGGANALNINSLRMLLHKSGSDSLEGNVSSQSILDDEDATKSLVRKVIQEGIEKIKEEPSISKRSIRWELGSCWMQHLQKQETSSDNCSKNKEDGNDVEQAVKGLGKQFKFLKKREKKSNNVDGTDSREQNDSSPGDVNDNADKVEPNSGDISNSSELEKLLSNEAFLRLKESGTDLHTKSVDELINMAHKFYDEVALPKLAMDFGSLELSPVDGRTLTDFMHLRGLKMRSLGQVVKLAENLPHIQSLCIHEMITRAFKHQLKAVIASVENVADLSAAIASTLNVLLGGSRTEDNDQSLNDDHSLRIQWLRMFLSQRFGWILNDEFQHLRKLSILRGLCHKVGLELFPRDYDMESIKPFGKNDIISLVPVCKHVGCSSIDGRNLLEASKIALDKGKLEDAVNYGTKALAKMMVVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMDAFSLSVQHEQTTLKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFISPDPKRNDAQRKQRRAKLLPTSDNSQEHEDAVAEESIVFYDSRDAPSMVEENIEETNDTRDSQIPKENSDFTSYRPVTSEVVYEASSDEGWQEANSKGRSGNATNRKFGHKKRPLLSKLSINGSNNYIYRESSSRNEITSPPQRGVPRAMSDMSSPSRQPKARNIALNEDAVNYPTKTSVSKISSPASLSSLASKSISYKEVALAPPGTVLKPLLEKTEMDKINAEDEISSSLPVTSTNEGTFRSSIVNAVSQHDETEETQEIEPQQENSALEVEKVSLASSDQEKPTETNGSKLSAAAKPFNPGMLSMSHHLNSGSFTSMYDTDVSQGMNVEPVFPPAVARVPCGPRSPLYYRTNYTFRMKHGFSKSQTPIGERSGFGSPRIMNPHAPEFVPRNASQIEANDSNSNVSDEHNSLSEVSMAEKHKLDENFSEIKASSAKNSISESEKSEIARQILLSFLVKSVKENIDSVDESNESEGKVGKLENCDDEIAKDSAVINITYGNEEKSKAVPQSSDSDEQETLGVSEKKNSDEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR 1707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00081 1707 MobiDBLite consensus disorder prediction 620 661 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 147 177 - -
Vian9g00081 1707 SUPERFAMILY Hypothetical protein c14orf129, hspc210 225 291 IPR023231 -
Vian9g00081 1707 SMART tpr_5 1012 1045 IPR019734 GO:0005515
Vian9g00081 1707 SMART tpr_5 970 1003 IPR019734 GO:0005515
Vian9g00081 1707 SMART tpr_5 928 961 IPR019734 GO:0005515
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1231 1245 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 128 183 - -
Vian9g00081 1707 Gene3D Tetratricopeptide repeat domain 887 1132 IPR011990 GO:0005515
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1418 1439 - -
Vian9g00081 1707 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 883 1133 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1228 1253 - -
Vian9g00081 1707 Pfam Translation initiation factor eIF3 subunit 135 715 857 IPR033646 -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1645 1669 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1143 1173 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1394 1413 - -
Vian9g00081 1707 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Vian9g00081 1707 CDD CLU-central 717 858 IPR033646 -
Vian9g00081 1707 ProSiteProfiles TPR repeat profile. 928 961 IPR019734 GO:0005515
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1418 1441 - -
Vian9g00081 1707 Pfam Tetratricopeptide repeat 927 997 - -
Vian9g00081 1707 Pfam Tetratricopeptide repeat 1011 1085 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1139 1173 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1274 1301 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1647 1661 - -
Vian9g00081 1707 MobiDBLite consensus disorder prediction 1 25 - -
Vian9g00081 1707 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 7 1424 IPR027523 GO:0006996
Vian9g00081 1707 SUPERFAMILY TPR-like 891 1047 IPR011990 GO:0005515
Vian9g00081 1707 ProSiteProfiles Clueless (Clu) domain profile. 322 594 IPR025697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00081 Vian-Chr9 669211 679807 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00081 K03255 - gmx:100784276 2787.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00081 9 669211 679807 Vian9g00081 9 669211 679807 ECH