Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00080 ATGGCTTCCACCGCCGCCACCACCACCTACGCCTCCGACCCCACAACCCCTAACACCACCTTCGTCCAAGCAGACCCATCCAACTTCCGCGCCGTCGTCCAGAAACTCACCGGGGCCTCCGACGACCCCGCCGCCCCAAAACTGCCCCTCACTCTTCCCTCGCGGCTGGCGGCCCAATCTCCCCTGGTCGGCCCAAAAAGGCCCAACTTCAAGCTCCACGAGCGCCGCAACGCCGCCGCCAAGAACCTGGACCTCCCCGTGCTCATGGTCTCCTCCAACAACGTGTCCCTACTCCGAAACAGAACATGCGAGAACCTCGTCATGGCCTCACCCGTTTCCCCACTGGAGATGATGCTGGCGCGTGGGAGCCCACGCACGCCGCACGAGGAAGAAGAAGAGAGAGCGATTGCGGAAAAAGGATTCTACTTGCACCCTTCTCCTCTCTCCACCCCCAGAGCCTCTCAACCTCCTGAGCTATTGCCACTCTTCCCTTTGCATTCTCCCACCGCCACCGCCACCGCCGCCACCTCCACCACACACCACAACCACCGCCGCCACCACCTCAATTAA 570 0.6263 MASTAATTTYASDPTTPNTTFVQADPSNFRAVVQKLTGASDDPAAPKLPLTLPSRLAAQSPLVGPKRPNFKLHERRNAAAKNLDLPVLMVSSNNVSLLRNRTCENLVMASPVSPLEMMLARGSPRTPHEEEEERAIAEKGFYLHPSPLSTPRASQPPELLPLFPLHSPTATATAATSTTHHNHRRHHLN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00080 189 MobiDBLite consensus disorder prediction 146 165 - -
Vian9g00080 189 MobiDBLite consensus disorder prediction 1 23 - -
Vian9g00080 189 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 8 170 IPR039611 -
Vian9g00080 189 Pfam VQ motif 16 43 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00080 Vian-Chr9 663756 664325 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00080 - - var:108320542 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00080 9 663756 664325 Vian9g00080 9 663756 664325 ECH